RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMGAG00000005822	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	21451 bases	Strand	Plus strand
Position	9 : 12027203 - 12048653	RNA binding domain	Fip1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMGAP00000005833	Fip1	PF05182	5.3e-25	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMGAT00000006577	2492	541aa	ENSMGAP00000005833

Gene Model

Click here to download ENSMGAG00000005822's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMGAG00000005822's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000031109	45.9829	35.0427	meleagris_gallopavo	ENSMGAP00000005833	49.7227	37.8928

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	86.1368	84.8429	struthio_camelus_australis	ENSSCUP00000025194	94.5233	93.1034
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	92.7911	90.2033	serinus_canaria	ENSSCAP00000022531	89.9642	87.4552
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	90.7579	89.2791	gallus_gallus	ENSGALP00010016746	87.9928	86.5591
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	91.1275	89.0943	anas_platyrhynchos_platyrhynchos	ENSAPLP00000008233	87.7224	85.7651
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	90.7579	87.8004	taeniopygia_guttata	ENSTGUP00000005875	87.0567	84.2199
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	91.8669	90.2033	coturnix_japonica	ENSCJPP00005021247	89.0681	87.4552
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	84.4732	81.146	ficedula_albicollis	ENSFALP00000011253	89.7839	86.2475
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	91.1275	89.0943	anser_brachyrhynchus	ENSABRP00000022198	87.7224	85.7651
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	91.1275	88.9094	aquila_chrysaetos_chrysaetos	ENSACCP00020016686	87.7224	85.5872
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	92.4214	89.464	strigops_habroptila	ENSSHBP00005008216	88.968	86.121
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	91.1275	87.9852	parus_major	ENSPMJP00000016133	87.4113	84.3972
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	32.3475	20.1479	caenorhabditis_elegans	F32D1.9b.1	33.7838	21.0425
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	36.7837	23.6599	drosophila_melanogaster	FBpp0078568	28.388	18.2596
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	36.414	26.9871	ciona_intestinalis	ENSCINP00000007143	38.5519	28.5714
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	28.8355	23.6599	eptatretus_burgeri	ENSEBUP00000027357	66.6667	54.7009
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.6192	56.3771	callorhinchus_milii	ENSCMIP00000038662	46.7721	40.1845
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	76.7098	71.3493	latimeria_chalumnae	ENSLACP00000013565	82.3413	76.5873
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	73.0129	63.586	lepisosteus_oculatus	ENSLOCP00000018735	67.9862	59.2083
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	41.4048	33.6414	electrophorus_electricus	ENSEEEP00000032759	65.1163	52.907
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.4344	54.7135	oncorhynchus_kisutch	ENSOKIP00005113495	66.1682	55.3271
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	64.1405	54.5287	oncorhynchus_mykiss	ENSOMYP00000050646	65.9696	56.0836
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.6192	54.7135	salmo_salar	ENSSSAP00000146783	62.7208	52.2968
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.9889	55.268	salmo_trutta	ENSSTUP00000109221	67.4858	56.5217
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	83.549	79.8521	crocodylus_porosus	ENSCPRP00005010309	71.1811	68.0315
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	90.0185	85.5823	chrysemys_picta_bellii	ENSCPBP00000020643	87.9061	83.574
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	70.2403	67.098	laticauda_laticaudata	ENSLLTP00000020176	89.8345	85.8156
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	49.7227	38.2625	xenopus_tropicalis	ENSXETP00000069457	51.9305	39.9614
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	78.9279	73.3826	ornithorhynchus_anatinus	ENSOANP00000049547	63.7313	59.2537
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	75.7856	66.3586	erpetoichthys_calabaricus	ENSECRP00000020776	72.5664	63.5398
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	14.4177	10.536	ciona_savignyi	ENSCSAVP00000002037	62.4	45.6
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	76.8946	72.8281	pelodiscus_sinensis	ENSPSIP00000011638	84.5528	80.0813
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	19.0388	10.9057	saccharomyces_cerevisiae	YJR093C	31.4985	18.0428
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	66.5434	53.2347	denticeps_clupeoides	ENSDCDP00000032022	67.0391	53.6313
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	89.464	84.8429	terrapene_carolina_triunguis	ENSTMTP00000027290	87.3646	82.852
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	72.8281	60.4436	scleropages_formosus	ENSSFOP00015016993	73.6449	61.1215
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	66.3586	54.8983	hucho_hucho	ENSHHUP00000075371	67.6083	55.9322
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	71.3493	60.8133	paramormyrops_kingsleyae	ENSPKIP00000035075	73.1061	62.3106
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	52.8651	42.329	leptobrachium_leishanense	ENSLLEP00000021726	55.4264	44.3798
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	83.549	77.8189	salvator_merianae	ENSSMRP00000015572	83.0882	77.3897
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.2495	53.7893	oncorhynchus_tshawytscha	ENSOTSP00005079315	65.9813	54.3925
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	89.2791	83.9187	gopherus_evgoodei	ENSGEVP00005018558	86.7145	81.5081
ENSMGAG00000005822	meleagris_gallopavo	ENSMGAP00000005833	65.4344	53.0499	pygocentrus_nattereri	ENSPNAP00000000360	67.5573	54.771

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression