RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSMFAG00000041560	Gene ID		Accession	-
Symbol	LRPPRC	Alias	-	Full Name	leucine rich pentatricopeptide repeat containing
Status	Confidence	Length	121359 bases	Strand	Plus strand
Position	13 : 64171092 - 64292450	RNA binding domain	PPR_3 , PPR_long , PPR
Summary	N.A.

RNA binding domains (RBDs)

Search:

Protein	Domain	Pfam ID	E-value	Domain number
ENSMFAP00000041864	PPR_3	PF13812	3.3e-25	1
ENSMFAP00000041864	PPR_3	PF13812	3.3e-25	2
ENSMFAP00000041864	PPR_3	PF13812	3.3e-25	3
ENSMFAP00000041864	PPR_long	PF17177	5.6e-21	4
ENSMFAP00000041864	PPR	PF01535	2.4e-28	5
ENSMFAP00000041864	PPR	PF01535	2.4e-28	6
ENSMFAP00000041864	PPR	PF01535	2.4e-28	7
ENSMFAP00000041864	PPR	PF01535	2.4e-28	8
ENSMFAP00000041864	PPR	PF01535	2.4e-28	9
ENSMFAP00000041886	PPR_3	PF13812	1.8e-25	1
ENSMFAP00000041886	PPR_3	PF13812	1.8e-25	2
ENSMFAP00000041886	PPR_3	PF13812	1.8e-25	3
ENSMFAP00000041886	PPR_long	PF17177	7.5e-22	4
ENSMFAP00000041886	PPR	PF01535	9.3e-29	5
ENSMFAP00000041886	PPR	PF01535	9.3e-29	6
ENSMFAP00000041886	PPR	PF01535	9.3e-29	7
ENSMFAP00000041886	PPR	PF01535	9.3e-29	8
ENSMFAP00000041886	PPR	PF01535	9.3e-29	9
ENSMFAP00000041891	PPR_3	PF13812	3.6e-21	1
ENSMFAP00000041891	PPR_3	PF13812	3.6e-21	2
ENSMFAP00000041891	PPR_3	PF13812	3.6e-21	3
ENSMFAP00000041891	PPR_long	PF17177	5.4e-18	4
ENSMFAP00000041891	PPR	PF01535	6.6e-16	5
ENSMFAP00000041891	PPR	PF01535	6.6e-16	6
ENSMFAP00000041891	PPR	PF01535	6.6e-16	7
ENSMFAP00000041895	PPR_3	PF13812	1.7e-23	1
ENSMFAP00000041895	PPR_3	PF13812	1.7e-23	2
ENSMFAP00000041895	PPR_3	PF13812	1.7e-23	3
ENSMFAP00000041895	PPR_long	PF17177	1.1e-15	4
ENSMFAP00000041895	PPR	PF01535	8.4e-19	5
ENSMFAP00000041895	PPR	PF01535	8.4e-19	6
ENSMFAP00000049147	PPR_3	PF13812	2.8e-25	1
ENSMFAP00000049147	PPR_3	PF13812	2.8e-25	2
ENSMFAP00000049147	PPR_3	PF13812	2.8e-25	3
ENSMFAP00000049147	PPR_long	PF17177	3.4e-21	4
ENSMFAP00000049147	PPR	PF01535	6.2e-29	5
ENSMFAP00000049147	PPR	PF01535	6.2e-29	6
ENSMFAP00000049147	PPR	PF01535	6.2e-29	7
ENSMFAP00000049147	PPR	PF01535	6.2e-29	8
ENSMFAP00000049147	PPR	PF01535	6.2e-29	9
ENSMFAP00000059513	PPR_3	PF13812	1.9e-23	1
ENSMFAP00000059513	PPR_3	PF13812	1.9e-23	2
ENSMFAP00000059513	PPR_3	PF13812	1.9e-23	3
ENSMFAP00000059513	PPR_long	PF17177	9.8e-16	4
ENSMFAP00000059513	PPR	PF01535	4e-22	5
ENSMFAP00000059513	PPR	PF01535	4e-22	6
ENSMFAP00000059513	PPR	PF01535	4e-22	7
ENSMFAP00000059513	PPR	PF01535	4e-22	8
ENSMFAP00000062236	PPR_3	PF13812	2e-25	1
ENSMFAP00000062236	PPR_3	PF13812	2e-25	2
ENSMFAP00000062236	PPR_3	PF13812	2e-25	3
ENSMFAP00000062236	PPR_long	PF17177	1.6e-21	4
ENSMFAP00000062236	PPR	PF01535	3.2e-27	5
ENSMFAP00000062236	PPR	PF01535	3.2e-27	6
ENSMFAP00000062236	PPR	PF01535	3.2e-27	7
ENSMFAP00000062236	PPR	PF01535	3.2e-27	8
ENSMFAP00000062236	PPR	PF01535	3.2e-27	9
ENSMFAP00000063328	PPR_3	PF13812	2.6e-25	1
ENSMFAP00000063328	PPR_3	PF13812	2.6e-25	2
ENSMFAP00000063328	PPR_3	PF13812	2.6e-25	3
ENSMFAP00000063328	PPR_long	PF17177	3e-21	4
ENSMFAP00000063328	PPR	PF01535	1.7e-26	5
ENSMFAP00000063328	PPR	PF01535	1.7e-26	6
ENSMFAP00000063328	PPR	PF01535	1.7e-26	7
ENSMFAP00000063328	PPR	PF01535	1.7e-26	8
ENSMFAP00000063328	PPR	PF01535	1.7e-26	9
ENSMFAP00000064247	PPR_3	PF13812	7.5e-21	1
ENSMFAP00000064247	PPR_3	PF13812	7.5e-21	2
ENSMFAP00000064247	PPR	PF01535	1.6e-21	3
ENSMFAP00000064247	PPR	PF01535	1.6e-21	4
ENSMFAP00000064247	PPR	PF01535	1.6e-21	5

Showing 1 to 71 of 71 entries

Pubmed ID	Full Name	Cell	Author	Time	Doi
No data available in table

Pubmed ID	Title	Author	Time	Journal
No data available in table

Transcripts

Show entries

Search:

Name	Transcript ID	bp	Protein	Translation ID
LRPPRC-201	ENSMFAT00000016142	4763	1461aa	ENSMFAP00000041864
LRPPRC-202	ENSMFAT00000089901	4676	1432aa	ENSMFAP00000064247
LRPPRC-203	ENSMFAT00000097490	4649	1423aa	ENSMFAP00000049147
LRPPRC-204	ENSMFAT00000085344	4580	1397aa	ENSMFAP00000063328
LRPPRC-205	ENSMFAT00000101238	7294	1360aa	ENSMFAP00000062236
LRPPRC-206	ENSMFAT00000016173	2221	631aa	ENSMFAP00000041895
LRPPRC-207	ENSMFAT00000016169	1660	531aa	ENSMFAP00000041891
LRPPRC-208	ENSMFAT00000016164	4276	1374aa	ENSMFAP00000041886
LRPPRC-209	ENSMFAT00000090810	2533	661aa	ENSMFAP00000059513

Showing 1 to 9 of 9 entries

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Gene Model

Click here to download ENSMFAG00000041560's gene model file

ensgID	Trait	pValue	Pubmed ID
No data available in table

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID
No data available in table

Protein-Protein Interaction (PPI)

Click here to download ENSMFAG00000041560's PPI file

Orthologs

Show entries

Search:

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	75.3593	61.191	ornithorhynchus_anatinus	ENSOANP00000023122	78.4188	63.6752
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	77.0021	63.7919	sarcophilus_harrisii	ENSSHAP00000043674	75.6048	62.6344
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	53.525	43.8741	notamacropus_eugenii	ENSMEUP00000004059	61.0938	50.0781
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	89.4593	83.0938	callithrix_jacchus	ENSCJAP00000001418	93.2905	86.6524
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	90.4175	85.8316	homo_sapiens	ENSP00000260665	94.7633	89.957
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	87.9535	82.8884	pan_paniscus	ENSPPAP00000036350	92.5793	87.2478
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	98.3573	97.4675	papio_anubis	ENSPANP00000006402	98.3573	97.4675
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	85.6263	79.3292	balaenoptera_musculus	ENSBMSP00010017003	89.8707	83.2615
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	85.4894	77.8234	ursus_americanus	ENSUAMP00000029842	89.534	81.5054
ENSMFAG00000041560	macaca_fascicularis	ENSMFAP00000041864	86.3107	79.3977	felis_catus	ENSFCAP00000012491	90.4591	83.2138

Showing 1 to 10 of 152 entries

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Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression