Description

Ensembl ID ENSMCSG00000006563 Gene ID Accession -
Symbol Alias - Full Name poly(A)-specific ribonuclease
Status Confidence Length 42656 bases Strand Minus strand
Position 14 : 12507850 - 12550505 RNA binding domain RNA_bind , CAF1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMCSP00000010880 RNA_bind PF08675 7.7e-33 1
ENSMCSP00000010880 CAF1 PF04857 7.7e-59 2
ENSMCSP00000010999 RNA_bind PF08675 8.2e-33 1
ENSMCSP00000010999 CAF1 PF04857 1.9e-62 2
ENSMCSP00000010926 RNA_bind PF08675 8.5e-33 1
ENSMCSP00000010926 CAF1 PF04857 1.2e-77 2
ENSMCSP00000010605 RNA_bind PF08675 8.6e-33 1
ENSMCSP00000010605 CAF1 PF04857 3.5e-62 2
ENSMCSP00000010305 RNA_bind PF08675 8.9e-33 1
ENSMCSP00000010305 CAF1 PF04857 2.3e-73 2
ENSMCSP00000010305 CAF1 PF04857 2.3e-73 3
ENSMCSP00000010791 RNA_bind PF08675 9.2e-33 1
ENSMCSP00000010791 CAF1 PF04857 1.7e-74 2
ENSMCSP00000010813 RNA_bind PF08675 9.2e-33 1
ENSMCSP00000010813 CAF1 PF04857 1.3e-77 2
ENSMCSP00000010826 RNA_bind PF08675 5.7e-12 1
ENSMCSP00000010826 CAF1 PF04857 1.1e-72 2
ENSMCSP00000011021 CAF1 PF04857 9.5e-79 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSMCST00000010564 1806 601aa ENSMCSP00000010305
- ENSMCST00000010872 1773 590aa ENSMCSP00000010605
- ENSMCST00000011068 1884 627aa ENSMCSP00000010791
- ENSMCST00000011092 1869 622aa ENSMCSP00000010813
- ENSMCST00000011107 1704 567aa ENSMCSP00000010826
- ENSMCST00000011165 1866 552aa ENSMCSP00000010880
- ENSMCST00000011212 1818 605aa ENSMCSP00000010926
- ENSMCST00000011291 1761 586aa ENSMCSP00000010999
- ENSMCST00000011310 1290 429aa ENSMCSP00000011021

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMCSG00000006563

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMCSG00000006563

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression