RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSMCSG00000006563 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
poly(A)-specific ribonuclease |
Status |
Confidence |
Length |
42656 bases |
Strand |
Minus strand |
Position |
14 : 12507850 - 12550505 |
RNA binding domain |
RNA_bind , CAF1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSMCSP00000010880 |
RNA_bind |
PF08675 |
7.7e-33 |
1 |
ENSMCSP00000010880 |
CAF1 |
PF04857 |
7.7e-59 |
2 |
ENSMCSP00000010999 |
RNA_bind |
PF08675 |
8.2e-33 |
1 |
ENSMCSP00000010999 |
CAF1 |
PF04857 |
1.9e-62 |
2 |
ENSMCSP00000010926 |
RNA_bind |
PF08675 |
8.5e-33 |
1 |
ENSMCSP00000010926 |
CAF1 |
PF04857 |
1.2e-77 |
2 |
ENSMCSP00000010605 |
RNA_bind |
PF08675 |
8.6e-33 |
1 |
ENSMCSP00000010605 |
CAF1 |
PF04857 |
3.5e-62 |
2 |
ENSMCSP00000010305 |
RNA_bind |
PF08675 |
8.9e-33 |
1 |
ENSMCSP00000010305 |
CAF1 |
PF04857 |
2.3e-73 |
2 |
ENSMCSP00000010305 |
CAF1 |
PF04857 |
2.3e-73 |
3 |
ENSMCSP00000010791 |
RNA_bind |
PF08675 |
9.2e-33 |
1 |
ENSMCSP00000010791 |
CAF1 |
PF04857 |
1.7e-74 |
2 |
ENSMCSP00000010813 |
RNA_bind |
PF08675 |
9.2e-33 |
1 |
ENSMCSP00000010813 |
CAF1 |
PF04857 |
1.3e-77 |
2 |
ENSMCSP00000010826 |
RNA_bind |
PF08675 |
5.7e-12 |
1 |
ENSMCSP00000010826 |
CAF1 |
PF04857 |
1.1e-72 |
2 |
ENSMCSP00000011021 |
CAF1 |
PF04857 |
9.5e-79 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSMCST00000010564 |
1806 |
601aa |
ENSMCSP00000010305 |
- |
ENSMCST00000010872 |
1773 |
590aa |
ENSMCSP00000010605 |
- |
ENSMCST00000011068 |
1884 |
627aa |
ENSMCSP00000010791 |
- |
ENSMCST00000011092 |
1869 |
622aa |
ENSMCSP00000010813 |
- |
ENSMCST00000011107 |
1704 |
567aa |
ENSMCSP00000010826 |
- |
ENSMCST00000011165 |
1866 |
552aa |
ENSMCSP00000010880 |
- |
ENSMCST00000011212 |
1818 |
605aa |
ENSMCSP00000010926 |
- |
ENSMCST00000011291 |
1761 |
586aa |
ENSMCSP00000010999 |
- |
ENSMCST00000011310 |
1290 |
429aa |
ENSMCSP00000011021 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMCSG00000006563 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSMCSG00000006563 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |