RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSMCSG00000002984	Gene ID		Accession	-
Symbol		Alias	-	Full Name	tetratricopeptide repeat domain 39A
Status	Confidence	Length	24846 bases	Strand	Minus strand
Position	8 : 24755092 - 24779937	RNA binding domain	Iml2-TPR_39
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMCSP00000004198	Iml2-TPR_39	PF10300	1.7e-143	1
ENSMCSP00000004198	Iml2-TPR_39	PF10300	1.7e-143	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMCST00000004295	1593	530aa	ENSMCSP00000004198

Gene Model

Click here to download ENSMCSG00000002984's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMCSG00000002984's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMCSG00000002984

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMCSG00000002984

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression