Description

Ensembl ID ENSMCSG00000000300 Gene ID Accession -
Symbol Alias - Full Name RNA polymerase I subunit A
Status Confidence Length 29454 bases Strand Plus strand
Position 4 : 6140892 - 6170345 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMCSP00000000858 RNA_pol_Rpb1_4 PF05000 9.9e-25 1
ENSMCSP00000000858 RNA_pol_Rpb1_1 PF04997 3.2e-19 2
ENSMCSP00000000858 RNA_pol_Rpb1_2 PF00623 4.5e-70 3
ENSMCSP00000000858 RNA_pol_Rpb1_3 PF04983 1.1e-38 4
ENSMCSP00000001259 RNA_pol_Rpb1_4 PF05000 1.1e-24 1
ENSMCSP00000001259 RNA_pol_Rpb1_1 PF04997 7.3e-22 2
ENSMCSP00000001259 RNA_pol_Rpb1_5 PF04998 4.8e-102 3
ENSMCSP00000001259 RNA_pol_Rpb1_2 PF00623 6.6e-70 4
ENSMCSP00000001259 RNA_pol_Rpb1_3 PF04983 1e-38 5
ENSMCSP00000001238 RNA_pol_Rpb1_4 PF05000 1.1e-24 1
ENSMCSP00000001238 RNA_pol_Rpb1_1 PF04997 1.3e-21 2
ENSMCSP00000001238 RNA_pol_Rpb1_5 PF04998 5e-102 3
ENSMCSP00000001238 RNA_pol_Rpb1_2 PF00623 6.6e-70 4
ENSMCSP00000001238 RNA_pol_Rpb1_3 PF04983 1e-38 5
ENSMCSP00000001273 RNA_pol_Rpb1_4 PF05000 1.3e-24 1
ENSMCSP00000001273 RNA_pol_Rpb1_1 PF04997 2.1e-22 2
ENSMCSP00000001273 RNA_pol_Rpb1_5 PF04998 5.1e-102 3
ENSMCSP00000001273 RNA_pol_Rpb1_2 PF00623 6.8e-70 4
ENSMCSP00000001273 RNA_pol_Rpb1_3 PF04983 9.9e-39 5
ENSMCSP00000001285 RNA_pol_Rpb1_4 PF05000 1.6e-24 1
ENSMCSP00000001285 RNA_pol_Rpb1_1 PF04997 1.3e-21 2
ENSMCSP00000001285 RNA_pol_Rpb1_5 PF04998 5.2e-102 3
ENSMCSP00000001285 RNA_pol_Rpb1_2 PF00623 6.8e-70 4
ENSMCSP00000001285 RNA_pol_Rpb1_3 PF04983 9.8e-39 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSMCST00000000879 3009 1002aa ENSMCSP00000000858
- ENSMCST00000001270 6044 1709aa ENSMCSP00000001238
- ENSMCST00000001291 6041 1708aa ENSMCSP00000001259
- ENSMCST00000001305 6002 1695aa ENSMCSP00000001273
- ENSMCST00000001317 5996 1693aa ENSMCSP00000001285

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMCSG00000000300

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMCSG00000000300

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression