| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSMAMG00000020617 | Gene ID |
113135555 |
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
uncharacterized LOC113135555 |
| Status |
Confidence |
Length |
9172 bases |
Strand |
Plus strand |
| Position |
19 : 2907906 - 2917077 |
RNA binding domain |
RNA_pol_Rpc4 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSMAMP00000030563 |
RNA_pol_Rpc4 |
PF05132 |
5.3e-28 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSMAMT00000031361 |
3078 |
394aa |
ENSMAMP00000030563 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000013173 | 50.3876 | 39.0181 | mastacembelus_armatus | ENSMAMP00000030563 | 49.4924 | 38.3249 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 68.2741 | 56.8528 | fundulus_heteroclitus | ENSFHEP00000023045 | 69.509 | 57.8811 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 65.9898 | 54.5685 | xiphophorus_maculatus | ENSXMAP00000014585 | 67.1835 | 55.5556 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 65.4822 | 53.8071 | poecilia_reticulata | ENSPREP00000005370 | 66.6667 | 54.7804 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 76.1421 | 69.797 | haplochromis_burtoni | ENSHBUP00000018382 | 78.7402 | 72.1785 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 77.1574 | 71.8274 | cyclopterus_lumpus | ENSCLMP00005035228 | 82.1622 | 76.4865 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 77.665 | 70.8122 | oreochromis_niloticus | ENSONIP00000009181 | 78.6632 | 71.7224 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 78.4264 | 72.0812 | astatotilapia_calliptera | ENSACLP00000000096 | 80.0518 | 73.5751 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 80.7107 | 72.5888 | sparus_aurata | ENSSAUP00010021511 | 80.7107 | 72.5888 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 84.264 | 76.9036 | dicentrarchus_labrax | ENSDLAP00005080483 | 82.793 | 75.5611 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 57.6142 | 44.9239 | cyprinodon_variegatus | ENSCVAP00000007409 | 65.9884 | 51.4535 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 80.4569 | 74.1117 | lates_calcarifer | ENSLCAP00010037532 | 80.8673 | 74.4898 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 81.2183 | 74.8731 | seriola_dumerili | ENSSDUP00000022007 | 79.2079 | 73.0198 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.4213 | 55.0761 | neolamprologus_brichardi | ENSNBRP00000030172 | 70.5539 | 63.2653 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 58.8832 | 48.4772 | poecilia_latipinna | ENSPLAP00000002397 | 67.052 | 55.2023 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 66.7513 | 56.3452 | poecilia_formosa | ENSPFOP00000011057 | 67.9587 | 57.3643 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 78.934 | 70.5584 | scophthalmus_maximus | ENSSMAP00000002336 | 79.9486 | 71.4653 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 82.2335 | 72.335 | labrus_bergylta | ENSLBEP00000012417 | 82.0253 | 72.1519 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 72.5888 | 66.2437 | amphilophus_citrinellus | ENSACIP00000004728 | 78.1421 | 71.3115 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 77.665 | 68.7817 | anabas_testudineus | ENSATEP00000033579 | 78.4615 | 69.4872 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 82.9949 | 75.3807 | cottoperca_gobio | ENSCGOP00000052908 | 81.3433 | 73.8806 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 64.9746 | 54.8223 | hippocampus_comes | ENSHCOP00000027206 | 70.137 | 59.1781 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 82.4873 | 74.6193 | amphiprion_ocellaris | ENSAOCP00000022325 | 78.8835 | 71.3592 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 74.6193 | 66.4975 | gasterosteus_aculeatus | ENSGACP00000020363 | 72.5926 | 64.6914 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 81.7259 | 73.8579 | amphiprion_percula | ENSAPEP00000022590 | 78.1553 | 70.6311 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 68.0203 | 61.9289 | pundamilia_nyererei | ENSPNYP00000011748 | 69.9739 | 63.7076 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 68.5279 | 59.6447 | cynoglossus_semilaevis | ENSCSEP00000024299 | 75.419 | 65.6425 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 79.9492 | 73.3503 | sander_lucioperca | ENSSLUP00000047869 | 81.8182 | 75.0649 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 84.264 | 74.8731 | larimichthys_crocea | ENSLCRP00005047468 | 83.8384 | 74.4949 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 74.6193 | 67.2589 | betta_splendens | ENSBSLP00000013304 | 76.5625 | 69.0104 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 74.8731 | 67.5127 | betta_splendens | ENSBSLP00000013342 | 76.8229 | 69.2708 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 71.5736 | 64.467 | stegastes_partitus | ENSSPAP00000013724 | 77.9006 | 70.1657 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 78.4264 | 72.0812 | maylandia_zebra | ENSMZEP00005004095 | 80.0518 | 73.5751 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 80.7107 | 72.335 | acanthochromis_polyacanthus | ENSAPOP00000014721 | 76.6265 | 68.6747 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 81.2183 | 74.8731 | seriola_lalandi_dorsalis | ENSSLDP00000020399 | 79.2079 | 73.0198 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 39.3401 | 23.3503 | drosophila_melanogaster | FBpp0074902 | 37.3494 | 22.1687 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 41.1168 | 30.203 | ciona_intestinalis | ENSCINP00000016627 | 46.4183 | 34.0974 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.4213 | 48.2234 | lepisosteus_oculatus | ENSLOCP00000007834 | 62.6943 | 49.2228 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.6751 | 49.2386 | clupea_harengus | ENSCHAP00000025186 | 65.1475 | 52.0107 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 60.6599 | 47.7157 | danio_rerio | ENSDARP00000061632 | 61.2821 | 48.2051 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 60.4061 | 45.4315 | carassius_auratus | ENSCARP00000051939 | 61.0256 | 45.8974 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 62.9442 | 47.2081 | carassius_auratus | ENSCARP00000061097 | 63.5897 | 47.6923 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 58.8832 | 47.4619 | astyanax_mexicanus | ENSAMXP00000020000 | 64.2659 | 51.8006 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.4213 | 47.2081 | ictalurus_punctatus | ENSIPUP00000012638 | 63.0208 | 48.4375 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 58.8832 | 46.7005 | electrophorus_electricus | ENSEEEP00000003580 | 63.2153 | 50.1362 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 66.2437 | 53.8071 | esox_lucius | ENSELUP00000018057 | 62.7404 | 50.9615 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 64.2132 | 51.269 | oncorhynchus_kisutch | ENSOKIP00005010402 | 62.3153 | 49.7537 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 63.9594 | 51.0152 | oncorhynchus_kisutch | ENSOKIP00005060598 | 62.069 | 49.5074 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 62.4365 | 50.5076 | oncorhynchus_mykiss | ENSOMYP00000112202 | 65.252 | 52.7851 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 64.2132 | 51.5228 | oncorhynchus_mykiss | ENSOMYP00000139410 | 63.4085 | 50.8772 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 59.8985 | 48.9848 | salmo_salar | ENSSSAP00000143127 | 64.8352 | 53.022 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 64.467 | 51.5228 | salmo_trutta | ENSSTUP00000077476 | 60.7655 | 48.5646 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 64.2132 | 51.269 | salmo_trutta | ENSSTUP00000104542 | 59.6698 | 47.6415 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 66.2437 | 53.2995 | gadus_morhua | ENSGMOP00000016967 | 63.9706 | 51.4706 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 62.6904 | 45.9391 | erpetoichthys_calabaricus | ENSECRP00000003292 | 61.75 | 45.25 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 60.6599 | 47.7157 | pygocentrus_nattereri | ENSPNAP00000013050 | 62.0779 | 48.8312 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 38.8325 | 28.1726 | ciona_savignyi | ENSCSAVP00000012110 | 44.0922 | 31.9885 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 56.0914 | 45.1777 | oncorhynchus_tshawytscha | ENSOTSP00005034746 | 64.058 | 51.5942 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 42.3858 | 30.4569 | sinocyclocheilus_grahami | ENSSGRP00000004032 | 55.1155 | 39.604 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 63.9594 | 49.7462 | scleropages_formosus | ENSSFOP00015039250 | 63.9594 | 49.7462 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 35.7868 | 18.5279 | saccharomyces_cerevisiae | YDL150W | 33.4123 | 17.2986 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 71.066 | 61.1675 | myripristis_murdjan | ENSMMDP00005053377 | 71.066 | 61.1675 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 65.2284 | 53.0457 | paramormyrops_kingsleyae | ENSPKIP00000010646 | 64.7355 | 52.6448 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.4213 | 47.2081 | denticeps_clupeoides | ENSDCDP00000006430 | 68.169 | 52.3944 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.4213 | 47.2081 | denticeps_clupeoides | ENSDCDP00000011457 | 68.169 | 52.3944 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 62.1827 | 47.7157 | cyprinus_carpio_carpio | ENSCCRP00000115442 | 62.982 | 48.329 |
| ENSMAMG00000020617 | mastacembelus_armatus | ENSMAMP00000030563 | 61.6751 | 46.4467 | cyprinus_carpio_carpio | ENSCCRP00000060684 | 62.4679 | 47.0437 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
