Description

Ensembl ID ENSMAMG00000000192 Gene ID 113125681 Accession -
Symbol srsf5a Alias - Full Name serine and arginine rich splicing factor 5a
Status Confidence Length 5915 bases Strand Minus strand
Position 22 : 3778745 - 3784659 RNA binding domain RRM_3 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSMAMP00000000272 RRM_3 PF08777 2.6e-07 1
ENSMAMP00000000272 RRM_1 PF00076 2.4e-33 2
ENSMAMP00000000272 RRM_1 PF00076 2.4e-33 3
ENSMAMP00000068126 RRM_1 PF00076 3.8e-17 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
srsf5a-201 ENSMAMT00000000277 1905 277aa ENSMAMP00000000272
srsf5a-202 ENSMAMT00000062763 696 128aa ENSMAMP00000068126

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000004207966.796953.5156mastacembelus_armatusENSMAMP0000000027261.732949.4585
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000002557158.452746.9914mastacembelus_armatusENSMAMP0000000027273.646259.2058
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000395174.061464.8464mastacembelus_armatusENSMAMP0000000027278.339368.5921
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000004795174.226860.8247mastacembelus_armatusENSMAMP0000000027225.992821.2996
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000002744255.510243.2653mastacembelus_armatusENSMAMP0000000027249.097538.2671
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000002923458.091344.3983mastacembelus_armatusENSMAMP0000000027250.541538.6282
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000001710453.688540.1639mastacembelus_armatusENSMAMP0000000027247.292435.3791
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000002642817.12069.72763mastacembelus_armatusENSMAMP0000000027215.88459.02527
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000002560942.913430.7087mastacembelus_armatusENSMAMP0000000027239.350228.1588
ENSMAMG00000000192mastacembelus_armatusENSMAMP000000352165234.4mastacembelus_armatusENSMAMP0000000027223.465715.5235
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000004707354.117641.1765mastacembelus_armatusENSMAMP0000000027233.21325.2708

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.057887.3646fundulus_heteroclitusENSFHEP0000000311973.065969.341
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027291.696887.3646xiphophorus_maculatusENSXMAP0000001285180.379776.5823
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.057887.7256poecilia_reticulataENSPREP0000002677380.441676.6562
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027291.696887.7256oryzias_latipesENSORLP0000001162385.810882.0946
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027296.750994.2238haplochromis_burtoniENSHBUP0000002954490.847588.4746
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027296.750994.9458cyclopterus_lumpusENSCLMP0000503886484.276782.7044
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.111994.5848oreochromis_niloticusENSONIP0000007719891.186488.8136
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.111994.5848astatotilapia_callipteraENSACLP0000004031790.878488.5135
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.472996.0289sparus_aurataENSSAUP0001006298471.428670.3704
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.194996.3899dicentrarchus_labraxENSDLAP0000507491091.582589.899
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.779889.5307oryzias_melastigmaENSOMEP0000003578494.833991.5129
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027289.891784.4765cyprinodon_variegatusENSCVAP0000002931084.121679.0541
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.194997.1119lates_calcariferENSLCAP0001005048995.104994.0559
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027288.086682.3105kryptolebias_marmoratusENSKMAP0000002010775.308670.3704
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027294.945892.0578takifugu_rubripesENSTRUP0000002709588.851386.1487
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027299.27898.1949seriola_dumeriliENSSDUP0000000833195.486194.4444
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.111994.5848neolamprologus_brichardiENSNBRP0000000089391.496689.1156
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.057887.0036poecilia_latipinnaENSPLAP0000000391079.439375.0779
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.418887.3646poecilia_formosaENSPFOP000000232878075.625
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.003685.9206scophthalmus_maximusENSSMAP0000005474685.765184.6975
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027279.422476.5343labrus_bergyltaENSLBEP0000002233083.018980
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027288.808785.9206amphilophus_citrinellusENSACIP0000001538289.78186.8613
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027296.028994.9458anabas_testudineusENSATEP0000000020592.682991.6376
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027289.169786.6426cottoperca_gobioENSCGOP0000005041068.611166.6667
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027292.418888.8087hippocampus_comesENSHCOP0000002652284.768281.457
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.55697.1119amphiprion_ocellarisENSAOCP0000001074793.174191.8089
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027284.476583.0325gasterosteus_aculeatusENSGACP0000001555692.12690.5512
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.194996.7509amphiprion_perculaENSAPEP0000001308292.832891.4676
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027245.848442.9603oryzias_javanicusENSOJAP0000002820287.586282.069
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027288.086684.4765nothobranchius_furzeriENSNFUP0001502410580.794777.4834
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.111994.5848pundamilia_nyerereiENSPNYP0000002821891.186488.8136
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027293.862892.4188cynoglossus_semilaevisENSCSEP0000001254783.067181.7891
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027295.667993.5018sander_luciopercaENSSLUP0000002275285.20983.2797
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.472995.6679larimichthys_croceaENSLCRP0000504687890.909189.2256
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027291.696887.7256oryzias_sinensisENSOSIP0000003404685.810882.0946
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027295.667994.2238betta_splendensENSBSLP0000004628894.306192.8826
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.91797.8339stegastes_partitusENSSPAP0000000365894.809793.7716
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027297.111994.5848maylandia_zebraENSMZEP0000501391391.186488.8136
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027298.55697.4729acanthochromis_polyacanthusENSAPOP0000001450792.229791.2162
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027299.27898.556seriola_lalandi_dorsalisENSSLDP0000000523094.827694.1379
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027277.617370.0361latimeria_chalumnaeENSLACP0000002034381.74973.7643
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027288.447779.4224lepisosteus_oculatusENSLOCP0000001734881.395373.0897
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027286.642680.8664clupea_harengusENSCHAP0000001337675.709870.6625
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027278.700472.9242danio_rerioENSDARP0000004331184.169977.9923
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027277.617372.9242carassius_auratusENSCARP0000000987778.754673.9927
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027277.256371.1191carassius_auratusENSCARP0000011922780.451174.0602
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027282.310575.8123astyanax_mexicanusENSAMXP0000002839882.909176.3636
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027281.949575.8123ictalurus_punctatusENSIPUP0000000494181.654775.5396
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027280.866474.3682electrophorus_electricusENSEEEP0000001399179.151972.7915
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027285.559678.7004esox_luciusENSELUP0000004006576.451670.3226
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.364680.5054oncorhynchus_kisutchENSOKIP0000502667672.672766.967
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.364679.7834oncorhynchus_kisutchENSOKIP0000503415977.564170.8333
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.003679.7834oncorhynchus_mykissENSOMYP0000005391665.135159.7297
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027288.086680.8664oncorhynchus_mykissENSOMYP0000005343473.053967.0659
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.003679.7834salmo_salarENSSSAP0000014603076.751670.3822
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027286.642679.7834salmo_salarENSSSAP0000004987072.948367.1733
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.364680.1444salmo_truttaENSSTUP0000006290276.340770.0315
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.364680.1444salmo_truttaENSSTUP0000005370771.176565.2941
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.364683.0325gadus_morhuaENSGMOP0000006641385.815681.5603
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027276.895366.787xenopus_tropicalisENSXETP0000003888581.297770.6107
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.729266.065chrysemys_picta_belliiENSCPBP0000003056280.859471.4844
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.729264.2599sphenodon_punctatusENSSPUP0000000264779.615468.4615
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451364.6209laticauda_laticaudataENSLLTP0000000112579.467768.0608
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451364.6209notechis_scutatusENSNSUP0000002447079.467768.0608
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451364.2599pseudonaja_textilisENSPTXP0000001759579.467767.6806
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.368264.6209anas_platyrhynchos_platyrhynchosENSAPLP0000000191473.835164.1577
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027273.646264.6209gallus_gallusENSGALP0001002929470.344861.7241
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027273.646264.6209meleagris_gallopavoENSMGAP0000001880454.447.7333
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343serinus_canariaENSSCAP0000001821371.929863.5088
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343parus_majorENSPMJP0000002021274.007265.343
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027243.321337.5451ailuropoda_melanoleucaENSAMEP0000004004675.949465.8228
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451366.065pelodiscus_sinensisENSPSIP0000000904181.640671.4844
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027283.393575.8123erpetoichthys_calabaricusENSECRP0000002519282.795775.2688
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.090364.2599anolis_carolinensisENSACAP0000003491379.693568.1992
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451364.6209naja_najaENSNNAP0000001854479.467768.0608
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027282.671576.8953pygocentrus_nattereriENSPNAP0000001528081.785776.0714
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343geospiza_fortisENSGFOP0000001107174.007265.343
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027262.815950.5415ciona_savignyiENSCSAVP0000001939969.047655.5556
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.368265.343taeniopygia_guttataENSTGUP0000002424743.096237.8661
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343ficedula_albicollisENSFALP0000002856859.766852.7697
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.003679.7834hucho_huchoENSHHUP0000004976378.501671.987
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027285.920679.0614hucho_huchoENSHHUP0000003647871.903366.1631
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027275.451364.9819podarcis_muralisENSPMRP0000000530178.867967.9245
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027286.642679.7834oncorhynchus_tshawytschaENSOTSP0000508552277.419471.2903
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027287.003680.1444oncorhynchus_tshawytschaENSOTSP0000500398372.809767.0695
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027255.956749.8195coturnix_japonicaENSCJPP0000502195584.699575.4098
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027278.700472.9242sinocyclocheilus_grahamiENSSGRP0000010214484.169977.9923
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027276.173370.7581sinocyclocheilus_grahamiENSSGRP0000003652480.228174.5247
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027268.23156.6787salvator_merianaeENSSMRP0000001225773.255860.8527
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027236.101127.0758cervus_hanglu_yarkandensisENSCHYP0000001644445.248933.9367
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027236.101127.0758cervus_hanglu_yarkandensisENSCHYP0000001695845.248933.9367
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027283.032577.2563scleropages_formosusENSSFOP0001504953781.560375.8865
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343strigops_habroptilaENSSHBP0000502319574.007265.343
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.729266.065chelonoidis_abingdoniiENSCABP0000002305080.859471.4844
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.368264.6209anser_brachyrhynchusENSABRP0000001785073.835164.1577
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027293.501889.1697myripristis_murdjanENSMMDP0000504202493.165588.8489
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.729266.065gopherus_evgoodeiENSGEVP0000502416480.859471.4844
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027277.256367.509leptobrachium_leishanenseENSLLEP0000003784267.084658.6207
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027280.144474.7292paramormyrops_kingsleyaeENSPKIP0000001529677.894772.6316
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007265.343aquila_chrysaetos_chrysaetosENSACCP0002000620174.007265.343
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.007264.9819struthio_camelus_australisENSSCUP0000000442668.333360
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027280.144475.4513denticeps_clupeoidesENSDCDP0000000565980.434875.7246
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027278.700472.9242cyprinus_carpio_carpioENSCCRP0000010917170.550265.3722
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027278.700474.0072cyprinus_carpio_carpioENSCCRP0000003415784.169979.1506
ENSMAMG00000000192mastacembelus_armatusENSMAMP0000000027274.729266.065terrapene_carolina_triunguisENSTMTP0000001109480.859471.4844

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression