RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSMALG00000001422	Gene ID	109973994	Accession	-
Symbol		Alias	-	Full Name	serine/arginine repetitive matrix 4
Status	Confidence	Length	59373 bases	Strand	Minus strand
Position	KV885005.1 : 251083 - 310455	RNA binding domain	SRRM_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSMALP00000001891	SRRM_C	PF15230	1.5e-24	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSMALT00000001945	2646	566aa	ENSMALP00000001891

Gene Model

Click here to download ENSMALG00000001422's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSMALG00000001422's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMALG00000001422

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSMALG00000001422

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression