Description

Ensembl ID ENSLSDG00000002657 Gene ID 110483081 Accession -
Symbol Alias - Full Name trinucleotide repeat containing adaptor 6B
Status Confidence Length 119096 bases Strand Minus strand
Position MUZQ01000080.1 : 3439855 - 3558950 RNA binding domain TNRC6-PABC_bdg , Ago_hook
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLSDP00000003481 TNRC6-PABC_bdg PF16608 3.8e-100 1
ENSLSDP00000003481 Ago_hook PF10427 2e-16 2
ENSLSDP00000003491 TNRC6-PABC_bdg PF16608 1.2e-91 1
ENSLSDP00000003491 TNRC6-PABC_bdg PF16608 1.2e-91 2
ENSLSDP00000003491 Ago_hook PF10427 2.7e-16 3
ENSLSDP00000003488 TNRC6-PABC_bdg PF16608 1.2e-91 1
ENSLSDP00000003488 TNRC6-PABC_bdg PF16608 1.2e-91 2
ENSLSDP00000003496 TNRC6-PABC_bdg PF16608 1.2e-91 1
ENSLSDP00000003496 TNRC6-PABC_bdg PF16608 1.2e-91 2
ENSLSDP00000003496 Ago_hook PF10427 4.5e-16 3
ENSLSDP00000003475 TNRC6-PABC_bdg PF16608 1.3e-91 1
ENSLSDP00000003475 TNRC6-PABC_bdg PF16608 1.3e-91 2
ENSLSDP00000003475 Ago_hook PF10427 3e-16 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLSDT00000004010 6137 1890aa ENSLSDP00000003475
- ENSLSDT00000004016 6053 1862aa ENSLSDP00000003481
- ENSLSDT00000004023 5978 1837aa ENSLSDP00000003488
- ENSLSDT00000004026 5966 1833aa ENSLSDP00000003491
- ENSLSDT00000004037 6161 1854aa ENSLSDP00000003496

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLSDG00000002657

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLSDG00000002657

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression