Description

Ensembl ID ENSLOCG00000006115 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 6229 bases Strand Plus strand
Position LG22 : 9532799 - 9539027 RNA binding domain SpoU_methylase
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLOCP00000007391 SpoU_methylase PF00588 2.9e-24 1
ENSLOCP00000007391 SpoU_methylase PF00588 2.9e-24 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLOCT00000007399 1323 441aa ENSLOCP00000007391

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000006115lepisosteus_oculatusENSLOCP000000199948.114864.18227lepisosteus_oculatusENSLOCP0000000739129.478515.1927
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000594726.198116.9329lepisosteus_oculatusENSLOCP0000000739118.594112.0181

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739122.67579.52381caenorhabditis_elegansT14B4.1.18.163273.42857
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739137.868528.3447petromyzon_marinusENSPMAP0000000175748.830436.5497
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739142.403631.2925callorhinchus_miliiENSCMIP0000002209353.581739.5415
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.9093latimeria_chalumnaeENSLACP0000000808552.183438.4279
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739141.950129.0249mustela_putorius_furoENSMPUP0000001369050.546434.9727
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739151.473938.5488sarcophilus_harrisiiENSSHAP0000001359950.110437.5276
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739147.61933.7868callithrix_jacchusENSCJAP0000009142841.666729.5635
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739134.240425.8503pseudonaja_textilisENSPTXP0000001090764.255348.5106
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739141.950128.5714laticauda_laticaudataENSLLTP0000000139850.271734.2391
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968338.7755canis_lupus_familiarisENSCAFP0084501907756.264840.4255
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648539.6825cercocebus_atysENSCATP0000001630057.38141.6667
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739146.258534.2404poecilia_reticulataENSPREP0000001467057.142942.2969
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739148.072636.2812gallus_gallusENSGALP0001004470152.088539.312
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.340138.7755xenopus_tropicalisENSXETP0000004860253.49441.2048
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.4558pan_troglodytesENSPTRP0000001452757.142941.4286
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739139.682530.839notamacropus_eugeniiENSMEUP0000001113158.139545.1827
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.229pan_paniscusENSPPAP0000003109957.142941.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648539.4558physeter_catodonENSPCTP0000500756746.080333.2696
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.4558gorilla_gorillaENSGGOP0000001513757.142941.4286
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28838.7755ailuropoda_melanoleucaENSAMEP0000000878155.555640.4255
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739155.782342.4036oncorhynchus_kisutchENSOKIP0000509889354.545541.4634
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739138.548831.5193echinops_telfairiENSETEP0000001450240.3833.0166
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739157.142941.0431esox_luciusENSELUP0000004080754.193638.9247
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.5896ovis_aries_rambouilletENSOARP0002001571056.97442.3168
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739151.700737.1882vulpes_vulpesENSVVUP0000002951748.101334.5992
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.6825macaca_nemestrinaENSMNEP0000001780057.142941.6667
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514738.7755ursus_maritimusENSUMAP0000001364655.79240.4255
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739152.38137.1882balaenoptera_musculusENSBMSP0001002462354.352938.5882
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968338.7755heterocephalus_glaber_femaleENSHGLP0000001335356.398140.5213
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739144.444432.1995serinus_canariaENSSCAP000000143325036.2245
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.4558delphinapterus_leucasENSDLEP0000001038156.264841.1348
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28839.0023choloepus_hoffmanniENSCHOP0000001007556.085941.0501
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28839.229equus_asinusENSEASP0000504334855.952441.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28840.3628bos_grunniensENSBGRP0000002523056.763342.9952
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739131.065823.356naja_najaENSNNAP0000000055263.425947.6852
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.113437.8685parus_majorENSPMJP0000002718254.166740.9314
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.0023dasypus_novemcinctusENSDNOP0000000331156.801941.0501
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.340137.8685electrophorus_electricusENSEEEP0000000329551.508138.7471
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739149.886637.6417camelus_dromedariusENSCDRP0000501980247.930336.1656
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739140.136131.2925ochotona_princepsENSOPRP0000000231847.708937.1968
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.0023takifugu_rubripesENSTRUP0000000356452.078837.6368
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229macaca_mulattaENSMMUP0000007704656.904841.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739138.095228.5714erinaceus_europaeusENSEEUP0000000055842.211131.6583
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739142.857131.5193geospiza_fortisENSGFOP0000001717647.014934.5771
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.4558mus_spretusMGP_SPRETEiJ_P002974356.459341.6268
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.793737.8685taeniopygia_guttataENSTGUP0000000745751.376138.3028
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.061239.0023mus_pahariMGP_PahariEiJ_P003509055.980941.1483
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739151.927439.0023procavia_capensisENSPCAP0000000749654.394340.8551
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.9093aotus_nancymaaeENSANAP0000000168255.477941.0256
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.4558monodon_monocerosENSMMNP0001502937256.264841.1348
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739152.607738.7755phascolarctos_cinereusENSPCIP0000003474351.670438.0846
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.4558felis_catusENSFCAP0000000155249.275436.0248
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229otolemur_garnettiiENSOGAP0000000120956.904841.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.566935.8277sorex_araneusENSSARP0000000559656.171339.7985
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739147.165534.6939octodon_degusENSODEP0000001271356.675841.6894
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739135.600928.7982pelodiscus_sinensisENSPSIP0000001597666.244753.5865
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741539.229tursiops_truncatusENSTTRP0000000361056.028440.8983
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.5896capra_hircusENSCHIP0000003051057.244742.5178
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.061239.4558chinchilla_lanigeraENSCLAP0000001243155.058840.9412
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739151.700738.0952vombatus_ursinusENSVURP0001001105952.054838.3562
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229marmota_marmota_marmotaENSMMMP0000002764056.904841.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.875340.3628saimiri_boliviensis_boliviensisENSSBOP0000002624457.894742.5837
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.340137.6417vicugna_pacosENSVPAP0000000872152.482339.2435
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28840.3628bison_bison_bisonENSBBBP0000001298856.763342.9952
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.9093sciurus_vulgarisENSSVLP0000501729656.190541.9048
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28839.229mus_musculusENSMUSP0000004288256.220141.3876
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.4558microcebus_murinusENSMICP0000003760956.666741.4286
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.229panthera_pardusENSPPRP0000001550456.532141.0926
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.229panthera_tigris_altaicaENSPTIP0000002562756.190541.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739129.705216.5533ornithorhynchus_anatinusENSOANP000000347898.562094.77124
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.1361myotis_lucifugusENSMLUP0000000137957.38142.1429
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229phocoena_sinusENSPSNP0000003075856.501240.8983
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229cricetulus_griseus_chok1gshdENSCGRP0000101350457.040641.2888
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739156.916142.8571oncorhynchus_mykissENSOMYP0000008731553.404340.2128
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739155.328839.6825cyprinodon_variegatusENSCVAP0000001592853.744538.5463
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741538.7755propithecus_coquereliENSPCOP0000000428156.294540.6176
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.4558neovison_visonENSNVIP0000000905356.264841.1348
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421840.1361pygocentrus_nattereriENSPNAP0000001361153.215139.2461
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739148.072635.6009coturnix_japonicaENSCJPP0000502047752.345738.7654
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739143.990933.1066crocodylus_porosusENSCPRP0000501807544.907433.7963
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741539.4558microtus_ochrogasterENSMOCP0000002136456.563241.5274
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.6825loxodonta_africanaENSLAFP0000001397755.79241.3712
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648539.4558macaca_fascicularisENSMFAP0000002802557.38141.4286
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741538.5488rattus_norvegicusENSRNOP0000005311756.698640.6699
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.875339.9093rhinopithecus_roxellanaENSRROP0000003651256.410341.0256
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739132.199526.3039ficedula_albicollisENSFALP0000000604763.96452.2523
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.8163salmo_salarENSSSAP0000004466655.148741.1899
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.0023nannospalax_galiliENSNGAP0000000826656.190540.9524
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739152.154237.6417dipodomys_ordiiENSDORP0000000708655.690140.1937
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968338.7755canis_lupus_dingoENSCAFP0002001363456.264840.4255
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19540.1361pteropus_vampyrusENSPVAP0000001103856.769642.0428
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739155.10240.3628sus_scrofaENSSSCP0000001886557.582942.1801
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.4558homo_sapiensENSP0000030608057.142941.4286
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968340.3628rhinolophus_ferrumequinumENSRFEP0001001505256.937842.5837
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739148.526135.8277meleagris_gallopavoENSMGAP0000000705236.896627.2414
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739140.589631.0658podarcis_muralisENSPMRP0000003716249.722238.0556
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739149.433137.415denticeps_clupeoidesENSDCDP0000003156953.431440.4412
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.875339.6825chlorocebus_sabaeusENSCSAP0000001037557.61941.6667
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739150.340137.6417aquila_chrysaetos_chrysaetosENSACCP0002002341753.237439.8082
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514739.6825mus_caroliMGP_CAROLIEiJ_P002834956.459341.866
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.229panthera_leoENSPLOP0000002294649.275435.8178
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28839.229mus_spicilegusENSMSIP0000002957056.220141.3876
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739152.607738.7755equus_caballusENSECAP0000002187552.370238.6005
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741539.4558tetraodon_nigroviridisENSTNIP0000001931355.633840.8451
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.061238.322carlito_syrichtaENSTSYP0000000555155.581940.1425
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.19539.229pongo_abeliiENSPPYP0000000874556.904841.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739123.809512.9252hucho_huchoENSHHUP0000003117943.388423.5537
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648539.6825urocitellus_parryiiENSUPAP0001002346457.517941.7661
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739142.403631.2925struthio_camelus_australisENSSCUP0000000814552.089138.4401
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.061239.0023cavia_porcellusENSCPOP0000001596055.058840.4706
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739143.310733.1066sinocyclocheilus_grahamiENSSGRP0000009295956.508943.1953
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.229nomascus_leucogenysENSNLEP0000002583056.666741.1905
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739151.700739.229monodelphis_domesticaENSMODP0000001256150.892938.6161
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968338.0952betta_splendensENSBSLP0000002531850.746335.8209
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.28838.5488jaculus_jaculusENSJJAP0000002484056.626540.9639
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739147.845836.7347anser_brachyrhynchusENSABRP0000001264952.618540.399
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739152.154238.322oryctolagus_cuniculusENSOCUP0000000191255.690140.9201
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739148.526134.4671sander_luciopercaENSSLUP0000003143251.07436.2768
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421839.9093papio_anubisENSPANP0000001946557.007141.8052
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.875340.3628cebus_imitatorENSCCAP0000004062357.894742.5837
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.875339.9093ictidomys_tridecemlineatusENSSTOP0000001470357.756642.0048
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421841.2698cervus_hanglu_yarkandensisENSCHYP0000001353457.007143.2304
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.421840.8163moschus_moschiferusENSMMSP0000001609856.87242.654
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.514738.7755ursus_americanusENSUAMP0000001720455.79240.4255
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.0023peromyscus_maniculatus_bairdiiENSPEMP0000002636056.666740.9524
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739158.049946.0317paramormyrops_kingsleyaeENSPKIP0000003271554.700943.3761
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.1361mandrillus_leucophaeusENSMLEP0000002019457.38142.1429
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739156.689342.8571oncorhynchus_tshawytschaENSOTSP0000507109454.229940.9978
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.968339.6825mesocricetus_auratusENSMAUP0000002094556.801941.7661
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739155.782341.7234gasterosteus_aculeatusENSGACP0000001452454.788440.98
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739154.648540.1361rhinopithecus_bietiENSRBIP0000004184757.244742.0428
ENSLOCG00000006115lepisosteus_oculatusENSLOCP0000000739153.741538.7755prolemur_simusENSPSMP0000000132556.294540.6176

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression