Description

Ensembl ID ENSLOCG00000002879 Gene ID 102687924 Accession -
Symbol SRRM3 Alias - Full Name serine/arginine repetitive matrix protein 3-like
Status Confidence Length 94830 bases Strand Plus strand
Position LG22 : 3086039 - 3180868 RNA binding domain cwf21 , SRRM_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLOCP00000003400 cwf21 PF08312 2.5e-15 1
ENSLOCP00000003391 cwf21 PF08312 6.8e-15 1
ENSLOCP00000003391 SRRM_C PF15230 1.9e-25 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SRRM3-201 ENSLOCT00000003398 2178 667aa ENSLOCP00000003391
SRRM3-202 ENSLOCT00000003407 2145 328aa ENSLOCP00000003400

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000002879

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339148.725638.8306latimeria_chalumnaeENSLACP0000000907254.713843.6027
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339131.93426.6867sphenodon_punctatusENSSPUP0000000811761.560751.4451
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.92245.2774oreochromis_niloticusENSONIP0000001602357.650746.677
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339131.184426.6867sarcophilus_harrisiiENSSHAP0000004079561.176552.3529
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.872643.3283callithrix_jacchusENSCJAP0000003000056.04944.2573
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.172443.0285canis_lupus_familiarisENSCAFP0084500623256.097643.75
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339148.125940.1799cercocebus_atysENSCATP0000004106156.713847.3498
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.172446.4768poecilia_reticulataENSPREP0000001196757.548.4375
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.022544.8276chrysemys_picta_belliiENSCPBP0000004042857.795347.0866
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122944.5277gallus_gallusENSGALP0001004429057.575847.3684
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.073543.928xenopus_tropicalisENSXETP0000008212555.924246.2875
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.572742.8786pan_troglodytesENSPTRP0000003304055.742743.7979
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339136.731629.8351notamacropus_eugeniiENSMEUP0000001278641.245833.5017
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339126.836622.1889physeter_catodonENSPCTP0000501296948.773840.327
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.470850.3748salmo_truttaENSSTUP0000003923359.724351.4548
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.421346.4768astyanax_mexicanusENSAMXP0000001653061.182149.5208
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339147.076537.7811gorilla_gorillaENSGGOP0000003159456.272445.1613
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339130.284925.0375ailuropoda_melanoleucaENSAMEP0000003390255.191345.6284
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.920550.5247oncorhynchus_kisutchENSOKIP0000502090160.368751.7665
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.772147.6762esox_luciusENSELUP0000005820258.034349.61
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.523242.2789ovis_aries_rambouilletENSOARP0002003072455.177743.5858
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.823142.5787balaenoptera_musculusENSBMSP0001002893855.145943.6252
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.022544.3778haplochromis_burtoniENSHBUP0000002395757.254346.1778
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.572744.078astatotilapia_callipteraENSACLP0000000774156.96446.0094
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339139.430330.2849delphinapterus_leucasENSDLEP0000001072643.833333.6667
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339145.877135.0825equus_asinusENSEASP0000504389250.328938.4868
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.673242.4288bos_grunniensENSBGRP0000001338655.503943.876
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.721148.1259sparus_aurataENSSAUP0001000409759.505449.6136
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.172446.027parus_majorENSPMJP0000002595057.952848.3465
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339156.521747.2264carassius_auratusENSCARP0000000678962.624652.3256
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339149.625238.6807dasypus_novemcinctusENSDNOP0000003502250.923139.6923
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339136.431829.985anas_platyrhynchos_platyrhynchosENSAPLP0000002147654.120344.5434
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339127.886122.1889ochotona_princepsENSOPRP0000000768837.651829.9595
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.773642.8786takifugu_rubripesENSTRUP0000007772954.828744.5483
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.572743.0285macaca_mulattaENSMMUP0000005161955.657543.8838
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339130.284924.5877geospiza_fortisENSGFOP0000000081843.347635.1931
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.173944.3778oryzias_melastigmaENSOMEP0000000955955.063346.8354
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.673242.1289mus_spretusMGP_SPRETEiJ_P007411955.246943.3642
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339147.526238.5307taeniopygia_guttataENSTGUP0000003090046.755237.9056
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.97342.1289mus_pahariMGP_PahariEiJ_P005959955.555643.3642
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339147.676237.3313anolis_carolinensisENSACAP0000000043154.922343.0052
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339135.832129.2354procavia_capensisENSPCAP0000001284241.710334.0314
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339142.578734.033aotus_nancymaaeENSANAP0000002827846.103936.8507
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339150.524741.0795monodon_monocerosENSMMNP0001501071455.794745.3642
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339134.03327.4363phascolarctos_cinereusENSPCIP0000004408253.791543.3649
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.622246.7766kryptolebias_marmoratusENSKMAP0000001812257.608748.4472
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422843.0285felis_catusENSFCAP0000004576355.846244.1538
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.722642.8786otolemur_garnettiiENSOGAP0000001931455.810443.7309
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122942.5787octodon_degusENSODEP0000002173955.79643.8949
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.073542.4288pelodiscus_sinensisENSPSIP0000000863555.57344.427
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339135.232429.8351tursiops_truncatusENSTTRP0000001406540.727934.4887
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339146.326835.6822capra_hircusENSCHIP0000001213750.822439.1447
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.323841.979chinchilla_lanigeraENSCLAP0000001112053.363942.8135
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339135.682230.4348bison_bison_bisonENSBBBP0000001844740.33934.4068
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.722643.1784sciurus_vulgarisENSSVLP0000502640856.067644.2396
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.673242.1289mus_musculusENSMUSP0000011569555.246943.3642
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339151.274441.8291microcebus_murinusENSMICP0000000972758.361847.6109
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.170947.6762lates_calcariferENSLCAP0001003798359.509248.773
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339147.226438.2309panthera_pardusENSPPRP0000001283256.350645.6172
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.773645.2774oryzias_latipesENSORLP0000004028156.140448.1659
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339137.93130.4348ornithorhynchus_anatinusENSOANP0000004432951.632741.4286
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339144.977534.4828phocoena_sinusENSPSNP0000000758448.780537.3984
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422843.0285cricetulus_griseus_chok1gshdENSCGRP0000100925556.018544.2901
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422845.5772oncorhynchus_mykissENSOMYP0000011066356.018546.9136
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.770650.5247oncorhynchus_mykissENSOMYP0000001718760.030651.608
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122942.7286propithecus_coquereliENSPCOP0000003138955.283343.6447
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422845.4273xiphophorus_maculatusENSXMAP0000003580056.718847.3438
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.320846.9265pygocentrus_nattereriENSPNAP0000000322360.971849.0596
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122945.4273coturnix_japonicaENSCJPP0000501142457.852648.5577
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.572742.7286microtus_ochrogasterENSMOCP0000000321456.172843.9815
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339140.629730.8846loxodonta_africanaENSLAFP0000002132341.185431.307
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.823142.1289rattus_norvegicusENSRNOP0000000195755.401243.3642
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.373343.7781nothobranchius_furzeriENSNFUP0001502580156.507946.3492
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339146.626739.4303rhinopithecus_roxellanaENSRROP0000002219457.064248.2569
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339136.131929.2354ficedula_albicollisENSFALP0000002230955.5344.9309
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339151.724142.2789salmo_salarENSSSAP0000014919951.186941.8398
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.02150.2249salmo_salarENSSSAP0000002961559.538551.5385
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339160.269952.024erpetoichthys_calabaricusENSECRP0000002691963.91155.1669
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.523243.7781leptobrachium_leishanenseENSLLEP0000003152657.303446.87
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.823142.5787salvator_merianaeENSSMRP0000000399557.532145.5128
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339149.625238.6807canis_lupus_dingoENSCAFP0002001630052.623241.0175
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339140.629731.934pteropus_vampyrusENSPVAP0000000321541.500832.6187
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122942.1289sus_scrofaENSSSCP0000006879355.368143.0982
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422842.7286homo_sapiensENSP0000048085155.589643.6447
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.722643.3283rhinolophus_ferrumequinumENSRFEP0001001202955.30343.7879
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339132.833627.7361meleagris_gallopavoENSMGAP0000000342955.30346.7172
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339143.328336.5817denticeps_clupeoidesENSDCDP0000003685258.266149.1936
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339148.425837.0315chlorocebus_sabaeusENSCSAP0000001415654.013441.3043
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.271446.9265dicentrarchus_labraxENSDLAP0000506907557.185646.8563
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339129.98524.8876mus_caroliMGP_CAROLIEiJ_P007136858.479548.538
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339125.93721.4393bos_taurusENSBTAP0000004811755.448745.8333
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.572743.0285panthera_leoENSPLOP0000003063255.572543.8168
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.673241.979mus_spicilegusENSMSIP0000001418455.246943.2099
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.673242.4288bos_indicus_hybridENSBIXP0000503027955.332343.7403
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.872642.7286equus_caballusENSECAP0000001955655.707843.379
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339151.724141.5292tetraodon_nigroviridisENSTNIP0000001138952.914142.4847
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.872643.1784pongo_abeliiENSPPYP0000001958456.04944.1041
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.122942.8786urocitellus_parryiiENSUPAP0001001951155.62444.0678
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.871146.4768ictalurus_punctatusENSIPUP0000001832962.358650.0808
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339149.92538.8306cavia_porcellusENSCPOP0000003159053.45141.573
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.073541.2294cynoglossus_semilaevisENSCSEP0000001709850.070738.8967
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339144.377837.3313nomascus_leucogenysENSNLEP0000001026852.296843.9929
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339148.575740.03monodelphis_domesticaENSMODP0000004028552.854843.5563
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339155.322345.5772strigops_habroptilaENSSHBP0000501486858.018947.7987
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339150.824639.5802jaculus_jaculusENSJJAP0000002378152.314840.7407
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339149.325339.1304anser_brachyrhynchusENSABRP0000000169347.750437.881
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.421347.6762seriola_lalandi_dorsalisENSSLDP0000002579157.85548.0363
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.121446.9265sander_luciopercaENSSLUP0000001164058.887248.3771
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339142.428831.1844papio_anubisENSPANP0000000382949.046836.0485
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.872643.4783cebus_imitatorENSCCAP0000003064156.04944.4104
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.623744.5277oryzias_javanicusENSOJAP000000396755445.6923
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339154.422845.8771scleropages_formosusENSSFOP0001504768854.341345.8084
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339148.875640.4798ictidomys_tridecemlineatusENSSTOP0000001271058.844848.7365
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339130.434825.1874cervus_hanglu_yarkandensisENSCHYP0000001540346.136438.1818
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339156.221946.9265cyprinus_carpio_carpioENSCCRP0000017121861.475451.3115
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339156.671746.7766cyprinus_carpio_carpioENSCCRP0000011955361.264250.5673
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339153.373342.1289moschus_moschiferusENSMMSP0000000877655.023243.4312
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.473841.2294peromyscus_maniculatus_bairdiiENSPEMP0000001184155.20543.3754
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.620749.4753paramormyrops_kingsleyaeENSPKIP0000004015360.246550.8475
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339158.620750.3748oncorhynchus_tshawytschaENSOTSP0000504552459.877551.4548
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339152.173941.5292mesocricetus_auratusENSMAUP0000001934353.786742.813
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339157.271446.3268acanthochromis_polyacanthusENSAPOP0000002629759.133147.8328
ENSLOCG00000002879lepisosteus_oculatusENSLOCP0000000339151.124441.6792poecilia_formosaENSPFOP0000000896754.21344.1971

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression