RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSLOCG00000000340 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
3124 bases |
Strand |
Minus strand |
Position |
JH591556.1 : 45696 - 48819 |
RNA binding domain |
RVT_1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSLOCP00000000372 |
RVT_1 |
PF00078 |
1.1e-08 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSLOCT00000000372 |
2169 |
723aa |
ENSLOCP00000000372 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000010670 | 89.8649 | 85.8108 | lepisosteus_oculatus | ENSLOCP00000000372 | 18.3956 | 17.5657 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000003645 | 65.4088 | 61.6352 | lepisosteus_oculatus | ENSLOCP00000000372 | 14.3845 | 13.5546 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000011825 | 85.5721 | 76.1194 | lepisosteus_oculatus | ENSLOCP00000000372 | 23.7898 | 21.1618 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 9.68188 | 6.36238 | latimeria_chalumnae | ENSLACP00000009385 | 51.8519 | 34.0741 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 11.2033 | 7.33057 | latimeria_chalumnae | ENSLACP00000000181 | 42.4084 | 27.7487 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 13.278 | 8.99032 | haplochromis_burtoni | ENSHBUP00000003784 | 41.3793 | 28.0172 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 11.8949 | 8.16044 | sparus_aurata | ENSSAUP00010008094 | 45.7447 | 31.383 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 14.2462 | 12.5864 | carassius_auratus | ENSCARP00000031541 | 65.6051 | 57.9618 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 16.0443 | 12.5864 | electrophorus_electricus | ENSEEEP00000047348 | 55.2381 | 43.3333 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 14.5228 | 11.8949 | clupea_harengus | ENSCHAP00000055928 | 50 | 40.9524 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 15.3527 | 13.1397 | clupea_harengus | ENSCHAP00000000776 | 68.0982 | 58.2822 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 12.0332 | 7.19225 | oryzias_melastigma | ENSOMEP00000028951 | 48.0663 | 28.7293 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 15.0761 | 11.2033 | oryzias_latipes | ENSORLP00000040283 | 42.7451 | 31.7647 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 17.2891 | 14.2462 | oryzias_latipes | ENSORLP00000036004 | 61.5764 | 50.7389 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 10.9267 | 7.46888 | pygocentrus_nattereri | ENSPNAP00000030967 | 46.1988 | 31.5789 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 13.8313 | 9.40526 | maylandia_zebra | ENSMZEP00005032564 | 54.6448 | 37.1585 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 13.0014 | 8.57538 | oryzias_sinensis | ENSOSIP00000009399 | 46.3054 | 30.5419 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 15.7676 | 10.3734 | amphilophus_citrinellus | ENSACIP00000000533 | 46.1538 | 30.3644 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 9.82019 | 6.77732 | sinocyclocheilus_grahami | ENSSGRP00000094646 | 34.6341 | 23.9024 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 12.0332 | 8.16044 | sinocyclocheilus_grahami | ENSSGRP00000007825 | 47.541 | 32.2404 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 43.4302 | 27.1093 | poecilia_formosa | ENSPFOP00000027928 | 45.5733 | 28.447 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 24.8963 | 14.2462 | poecilia_formosa | ENSPFOP00000028062 | 54.2169 | 31.0241 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 12.4481 | 8.99032 | poecilia_formosa | ENSPFOP00000023604 | 65.6934 | 47.4453 |
ENSLOCG00000000340 | lepisosteus_oculatus | ENSLOCP00000000372 | 13.278 | 9.26694 | poecilia_formosa | ENSPFOP00000024766 | 49.2308 | 34.359 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |