Description

Ensembl ID ENSLOCG00000000340 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3124 bases Strand Minus strand
Position JH591556.1 : 45696 - 48819 RNA binding domain RVT_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLOCP00000000372 RVT_1 PF00078 1.1e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLOCT00000000372 2169 723aa ENSLOCP00000000372

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000001067089.864985.8108lepisosteus_oculatusENSLOCP0000000037218.395617.5657
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000364565.408861.6352lepisosteus_oculatusENSLOCP0000000037214.384513.5546
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000001182585.572176.1194lepisosteus_oculatusENSLOCP0000000037223.789821.1618

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLOCG00000000340lepisosteus_oculatusENSLOCP000000003729.681886.36238latimeria_chalumnaeENSLACP0000000938551.851934.0741
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037211.20337.33057latimeria_chalumnaeENSLACP0000000018142.408427.7487
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037213.2788.99032haplochromis_burtoniENSHBUP0000000378441.379328.0172
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037211.89498.16044sparus_aurataENSSAUP0001000809445.744731.383
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037214.246212.5864carassius_auratusENSCARP0000003154165.605157.9618
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037216.044312.5864electrophorus_electricusENSEEEP0000004734855.238143.3333
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037214.522811.8949clupea_harengusENSCHAP000000559285040.9524
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037215.352713.1397clupea_harengusENSCHAP0000000077668.098258.2822
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037212.03327.19225oryzias_melastigmaENSOMEP0000002895148.066328.7293
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037215.076111.2033oryzias_latipesENSORLP0000004028342.745131.7647
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037217.289114.2462oryzias_latipesENSORLP0000003600461.576450.7389
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037210.92677.46888pygocentrus_nattereriENSPNAP0000003096746.198831.5789
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037213.83139.40526maylandia_zebraENSMZEP0000503256454.644837.1585
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037213.00148.57538oryzias_sinensisENSOSIP0000000939946.305430.5419
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037215.767610.3734amphilophus_citrinellusENSACIP0000000053346.153830.3644
ENSLOCG00000000340lepisosteus_oculatusENSLOCP000000003729.820196.77732sinocyclocheilus_grahamiENSSGRP0000009464634.634123.9024
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037212.03328.16044sinocyclocheilus_grahamiENSSGRP0000000782547.54132.2404
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037243.430227.1093poecilia_formosaENSPFOP0000002792845.573328.447
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037224.896314.2462poecilia_formosaENSPFOP0000002806254.216931.0241
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037212.44818.99032poecilia_formosaENSPFOP0000002360465.693447.4453
ENSLOCG00000000340lepisosteus_oculatusENSLOCP0000000037213.2789.26694poecilia_formosaENSPFOP0000002476649.230834.359

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression