RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSLLTG00000011715	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	6880 bases	Strand	Plus strand
Position	BHFT01015611.1 : 49924 - 56803	RNA binding domain	SRRM_C
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLLTP00000015286	SRRM_C	PF15230	2.7e-18	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID

Gene Model

Click here to download ENSLLTG00000011715's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLLTG00000011715's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLTG00000011715

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLTG00000011715	laticauda_laticaudata	ENSLLTP00000015286	55.618	46.9101	anolis_carolinensis	ENSACAP00000004044	55.1532	46.5181
ENSLLTG00000011715	laticauda_laticaudata	ENSLLTP00000015286	46.3483	31.1798	ursus_americanus	ENSUAMP00000017321	43.1937	29.0576
ENSLLTG00000011715	laticauda_laticaudata	ENSLLTP00000015286	37.3596	30.0562	sarcophilus_harrisii	ENSSHAP00000045468	50.5703	40.6844
ENSLLTG00000011715	laticauda_laticaudata	ENSLLTP00000015286	43.8202	31.4607	physeter_catodon	ENSPCTP00005031134	41.2698	29.6296
ENSLLTG00000011715	laticauda_laticaudata	ENSLLTP00000015286	37.3596	25.2809	ursus_maritimus	ENSUMAP00000012812	34.456	23.3161

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression