RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSLLEG00000029304	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	12542 bases	Strand	Plus strand
Position	5 : 333162863 - 333175404	RNA binding domain	Mitoc_L55
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLLEP00000046213	Mitoc_L55	PF09776	4.8e-42	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSLLET00000048051	1059	133aa	ENSLLEP00000046213

Gene Model

Click here to download ENSLLEG00000029304's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLLEG00000029304's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000029304

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	34.5865	petromyzon_marinus	ENSPMAP00000000948	64.9573	39.3162
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	44.3609	callorhinchus_milii	ENSCMIP00000047195	66.6667	50.4273
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	66.9173	48.8722	latimeria_chalumnae	ENSLACP00000018490	67.4242	49.2424
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	45.1128	clupea_harengus	ENSCHAP00000019020	51.8072	36.1446
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	63.1579	43.609	danio_rerio	ENSDARP00000063716	63.1579	43.609
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	63.9098	43.609	carassius_auratus	ENSCARP00000097311	64.8855	44.2748
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	40.6015	astyanax_mexicanus	ENSAMXP00000042490	62.5954	41.2214
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	42.8571	ictalurus_punctatus	ENSIPUP00000001783	65.1515	43.1818
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	43.609	electrophorus_electricus	ENSEEEP00000003202	62.1212	43.9394
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	37.594	esox_lucius	ENSELUP00000062815	58.7786	38.1679
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	53.3835	30.0752	salmo_salar	ENSSSAP00000070828	44.375	25
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	39.0977	salmo_salar	ENSSSAP00000118002	64.2857	41.2698
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	39.0977	oncorhynchus_mykiss	ENSOMYP00000060747	61.8321	39.6947
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	39.8496	salmo_trutta	ENSSTUP00000045734	64.8	42.4
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	38.3459	salmo_trutta	ENSSTUP00000092916	60	37.7778
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	42.8571	gadus_morhua	ENSGMOP00000020432	56.6434	39.8601
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	54.8872	39.0977	fundulus_heteroclitus	ENSFHEP00000007068	52.518	37.4101
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	40.6015	poecilia_reticulata	ENSPREP00000030014	55.7143	38.5714
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	40.6015	xiphophorus_maculatus	ENSXMAP00000007955	55.7143	38.5714
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	59.3985	40.6015	oryzias_latipes	ENSORLP00000038678	32.5103	22.2222
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.0902	oreochromis_niloticus	ENSONIP00000051454	59.0909	36.3636
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	37.594	cyclopterus_lumpus	ENSCLMP00005043246	54.0541	33.7838
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.8421	haplochromis_burtoni	ENSHBUP00000025734	56.5217	35.5072
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.8421	astatotilapia_calliptera	ENSACLP00000007621	56.5217	35.5072
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	42.8571	lates_calcarifer	ENSLCAP00010017513	56.25	39.5833
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	41.3534	sparus_aurata	ENSSAUP00010056568	58.2734	39.5683
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	48.8722	chrysemys_picta_bellii	ENSCPBP00000002195	69.3548	52.4194
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	65.4135	49.6241	xenopus_tropicalis	ENSXETP00000105135	64.9254	49.2537
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	42.1053	crocodylus_porosus	ENSCPRP00005003439	64.8	44.8
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	46.6165	sphenodon_punctatus	ENSSPUP00000000902	64	49.6
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	55.6391	36.0902	laticauda_laticaudata	ENSLLTP00000015769	58.7302	38.0952
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	56.391	36.8421	notechis_scutatus	ENSNSUP00000020160	59.5238	38.8889
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	37.594	pseudonaja_textilis	ENSPTXP00000013853	60.3175	39.6825
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.0902	anas_platyrhynchos_platyrhynchos	ENSAPLP00000025398	17.4888	10.7623
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	37.594	gallus_gallus	ENSGALP00010039229	36.4486	23.3645
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.8421	meleagris_gallopavo	ENSMGAP00000023585	51.6556	32.4503
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	55.6391	33.8346	serinus_canaria	ENSSCAP00000007950	57.8125	35.1562
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	56.391	33.0827	parus_major	ENSPMJP00000004622	59.0551	34.6457
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	42.1053	ornithorhynchus_anatinus	ENSOANP00000036876	67.5	46.6667
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	59.3985	40.6015	dicentrarchus_labrax	ENSDLAP00005075336	55.6338	38.0282
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	39.8496	erpetoichthys_calabaricus	ENSECRP00000014262	60.6061	40.1515
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	48.1203	31.5789	erpetoichthys_calabaricus	ENSECRP00000031419	56.1404	36.8421
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	63.9098	48.8722	pelodiscus_sinensis	ENSPSIP00000012059	68	52
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	42.1053	oryzias_melastigma	ENSOMEP00000026395	59.854	40.8759
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	39.8496	takifugu_rubripes	ENSTRUP00000063941	59.2593	39.2593
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	36.8421	neolamprologus_brichardi	ENSNBRP00000025436	55.7971	35.5072
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	39.8496	kryptolebias_marmoratus	ENSKMAP00000002615	60.6299	41.7323
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	52.6316	36.8421	naja_naja	ENSNNAP00000013455	42.6829	29.878
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	41.3534	phascolarctos_cinereus	ENSPCIP00000029360	60.3175	43.6508
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	39.8496	seriola_dumerili	ENSSDUP00000031367	55.7823	36.0544
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	41.3534	pygocentrus_nattereri	ENSPNAP00000030534	62.1212	41.6667
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	40.6015	poecilia_formosa	ENSPFOP00000012701	55.7143	38.5714
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	62.406	39.0977	scophthalmus_maximus	ENSSMAP00000008784	61.0294	38.2353
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	42.8571	labrus_bergylta	ENSLBEP00000020947	61.9048	45.2381
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	42.8571	labrus_bergylta	ENSLBEP00000014049	61.9048	45.2381
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	42.8571	29.3233	ficedula_albicollis	ENSFALP00000001120	35.8491	24.5283
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	48.1203	31.5789	ficedula_albicollis	ENSFALP00000026801	53.3333	35
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	55.6391	35.3383	cottoperca_gobio	ENSCGOP00000033214	43.787	27.8107
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	38.3459	amphilophus_citrinellus	ENSACIP00000002022	56.6176	37.5
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	52.6316	36.0902	gasterosteus_aculeatus	ENSGACP00000002772	76.087	52.1739
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	44.3609	podarcis_muralis	ENSPMRP00000026840	50	37.8205
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	62.406	45.1128	podarcis_muralis	ENSPMRP00000026800	66.4	48
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	38.3459	anabas_testudineus	ENSATEP00000065671	53.0612	34.6939
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	39.0977	oncorhynchus_tshawytscha	ENSOTSP00005049253	61.8321	39.6947
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	62.406	42.1053	sinocyclocheilus_grahami	ENSSGRP00000009619	68.0328	45.9016
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	41.3534	sinocyclocheilus_grahami	ENSSGRP00000006068	70.4348	47.8261
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	38.3459	hucho_hucho	ENSHHUP00000086054	61.0687	38.9313
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	39.0977	amphiprion_ocellaris	ENSAOCP00000011798	52.7778	36.1111
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	36.8421	salvator_merianae	ENSSMRP00000021759	62.9921	38.5827
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	40.6015	acanthochromis_polyacanthus	ENSAPOP00000001578	53.4722	37.5
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	36.8421	maylandia_zebra	ENSMZEP00005020768	56.5217	35.5072
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	56.391	39.0977	nothobranchius_furzeri	ENSNFUP00015047503	59.5238	41.2698
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	59.3985	36.0902	hippocampus_comes	ENSHCOP00000018735	43.4066	26.3736
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	38.3459	betta_splendens	ENSBSLP00000026358	51.6779	34.2282
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	36.8421	stegastes_partitus	ENSSPAP00000015381	53.9007	34.7518
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	47.3684	chelonoidis_abingdonii	ENSCABP00000020107	66.129	50.8064
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	39.0977	amphiprion_percula	ENSAPEP00000031438	53.4722	36.1111
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	39.0977	larimichthys_crocea	ENSLCRP00005005552	55.0725	37.6812
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.8947	37.594	mastacembelus_armatus	ENSMAMP00000033065	52.381	34.0136
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	61.6541	42.1053	oryzias_javanicus	ENSOJAP00000022955	59.854	40.8759
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	54.1353	36.0902	coturnix_japonica	ENSCJPP00005012391	63.7168	42.4779
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	36.0902	anser_brachyrhynchus	ENSABRP00000002898	64.2857	38.0952
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	57.1429	39.0977	cynoglossus_semilaevis	ENSCSEP00000030500	54.6763	37.4101
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	55.6391	33.0827	aquila_chrysaetos_chrysaetos	ENSACCP00020020258	62.1849	36.9748
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	58.6466	39.8496	oryzias_sinensis	ENSOSIP00000038589	32.2314	21.9008
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	49.6241	30.8271	oryzias_sinensis	ENSOSIP00000008730	42.3077	26.2821
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	49.6241	30.0752	oryzias_sinensis	ENSOSIP00000022998	27.0492	16.3934
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	59.3985	40.6015	sander_lucioperca	ENSSLUP00000048446	54.1096	36.9863
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	62.406	46.6165	gopherus_evgoodei	ENSGEVP00005017233	66.4	49.6
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	51.1278	31.5789	strigops_habroptila	ENSSHBP00005003978	27.3092	16.8675
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	63.1579	43.609	paramormyrops_kingsleyae	ENSPKIP00000022947	65.1163	44.9612
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	63.9098	48.1203	terrapene_carolina_triunguis	ENSTMTP00000010935	68	51.2
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.9023	39.8496	seriola_lalandi_dorsalis	ENSSLDP00000025170	55.102	36.0544
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	43.609	cyprinus_carpio_carpio	ENSCCRP00000147026	56.9536	38.4106
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	64.6617	44.3609	cyprinus_carpio_carpio	ENSCCRP00000043684	64.6617	44.3609
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	40.6015	denticeps_clupeoides	ENSDCDP00000009095	57.554	38.8489
ENSLLEG00000029304	leptobrachium_leishanense	ENSLLEP00000046213	60.1504	39.8496	myripristis_murdjan	ENSMMDP00005006023	55.5556	36.8056

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression