RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSLLEG00000014682	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	73865 bases	Strand	Plus strand
Position	5 : 110560770 - 110634634	RNA binding domain	AKAP7_NLS
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLLEP00000023112	AKAP7_NLS	PF10469	5.2e-43	1
ENSLLEP00000023178	AKAP7_NLS	PF10469	5.7e-43	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSLLET00000023988	1676	512aa	ENSLLEP00000023112
-	ENSLLET00000024055	1956	534aa	ENSLLEP00000023178

Gene Model

Click here to download ENSLLEG00000014682's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLLEG00000014682's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000010559	26.6962	17.4041	leptobrachium_leishanense	ENSLLEP00000023178	33.8951	22.0974

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	24.3446	15.1685	ciona_intestinalis	ENSCINP00000035695	54.6218	34.0336
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	29.0262	19.4757	lepisosteus_oculatus	ENSLOCP00000003594	57.4074	38.5185
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.8315	26.2172	latimeria_chalumnae	ENSLACP00000015769	77.5	58.3333
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	23.0337	15.1685	electrophorus_electricus	ENSEEEP00000011330	43.7722	28.8256
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	31.8352	19.2884	gadus_morhua	ENSGMOP00000012650	41.769	25.3071
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	36.1423	21.161	fundulus_heteroclitus	ENSFHEP00000017122	37.1869	21.7726
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	36.3296	20.5993	poecilia_reticulata	ENSPREP00000018727	37.4517	21.2355
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	36.1423	20.9738	xiphophorus_maculatus	ENSXMAP00000026969	37.2587	21.6216
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	21.3483	oryzias_latipes	ENSORLP00000026749	36.9261	22.7545
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	20.2247	oreochromis_niloticus	ENSONIP00000042982	35.5086	20.7294
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	25.6554	16.1049	cyclopterus_lumpus	ENSCLMP00005048521	50.7407	31.8519
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	20.2247	haplochromis_burtoni	ENSHBUP00000021108	35.7143	20.8494
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.8315	20.412	astatotilapia_calliptera	ENSACLP00000011266	35.7692	20.9615
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.8315	19.6629	lates_calcarifer	ENSLCAP00010038712	36.5422	20.6287
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	29.588	15.9176	lates_calcarifer	ENSLCAP00010004102	39.206	21.0918
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.5805	21.3483	sparus_aurata	ENSSAUP00010043914	36.8932	22.1359
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	30.3371	20.0375	xenopus_tropicalis	ENSXETP00000018064	28.5211	18.838
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	49.4382	32.9588	anas_platyrhynchos_platyrhynchos	ENSAPLP00000023651	39.0533	26.0355
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	50	32.5843	gallus_gallus	ENSGALP00010001261	39.9701	26.0479
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	43.2584	26.2172	meleagris_gallopavo	ENSMGAP00000025884	45.9245	27.833
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.8951	26.779	parus_major	ENSPMJP00000019579	73.2794	57.8947
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	49.6255	30.5243	ornithorhynchus_anatinus	ENSOANP00000034500	28.1915	17.3404
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	48.3146	31.2734	sarcophilus_harrisii	ENSSHAP00000023818	32.9502	21.3282
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	20.412	dicentrarchus_labrax	ENSDLAP00005079446	35.4406	20.8812
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	52.9963	32.0225	monodelphis_domestica	ENSMODP00000040626	28.557	17.2553
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	30.1498	20.2247	erpetoichthys_calabaricus	ENSECRP00000010123	28.0977	18.8482
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.5206	25.4682	pelodiscus_sinensis	ENSPSIP00000005668	77.8261	59.1304
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.2697	20.412	oryzias_melastigma	ENSOMEP00000017486	37.1197	22.1095
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	28.4644	17.2285	takifugu_rubripes	ENSTRUP00000056281	42.4581	25.6983
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.1461	19.4757	neolamprologus_brichardi	ENSNBRP00000029857	40.7834	23.9631
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.8951	20.5993	kryptolebias_marmoratus	ENSKMAP00000024804	35.9127	21.8254
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.4569	20.412	seriola_dumerili	ENSSDUP00000014975	36.8737	21.8437
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.5805	20.2247	poecilia_formosa	ENSPFOP00000010535	37.5494	21.3439
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	36.3296	20.412	poecilia_latipinna	ENSPLAP00000000237	40.9283	22.9958
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.206	20.9738	scophthalmus_maximus	ENSSMAP00000014056	37.751	22.49
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	23.97	15.7303	labrus_bergylta	ENSLBEP00000001856	46.3768	30.4348
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.4569	20.2247	labrus_bergylta	ENSLBEP00000010479	35.9375	21.0938
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	49.8127	33.3333	taeniopygia_guttata	ENSTGUP00000037606	39.6423	26.5276
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	30.3371	18.3521	cottoperca_gobio	ENSCGOP00000031422	40.6015	24.5614
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	25.0936	16.2921	amphilophus_citrinellus	ENSACIP00000020081	50.566	32.8302
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	21.7228	12.3596	gasterosteus_aculeatus	ENSGACP00000017469	46.4	26.4
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.206	19.4757	anabas_testudineus	ENSATEP00000048672	36.5759	20.2335
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	27.3408	17.2285	tetraodon_nigroviridis	ENSTNIP00000013876	46.2025	29.1139
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	19.8502	amphiprion_ocellaris	ENSAOCP00000007932	37.8323	21.6769
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	24.3446	14.794	acanthochromis_polyacanthus	ENSAPOP00000007534	50.1931	30.5019
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	24.3446	14.794	acanthochromis_polyacanthus	ENSAPOP00000029223	50.1931	30.5019
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	31.0861	18.1648	acanthochromis_polyacanthus	ENSAPOP00000013512	46.6292	27.2472
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.6442	20.2247	maylandia_zebra	ENSMZEP00005016621	36.7063	21.4286
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.8315	21.3483	nothobranchius_furzeri	ENSNFUP00015000603	37.8049	23.1707
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	32.0225	18.7266	hippocampus_comes	ENSHCOP00000023691	38.9522	22.779
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.0187	19.6629	betta_splendens	ENSBSLP00000023085	38.4774	21.6049
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.8951	19.2884	stegastes_partitus	ENSSPAP00000009301	37.6299	21.4137
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.0187	20.0375	amphiprion_percula	ENSAPEP00000026111	37.4	21.4
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.4569	20.2247	larimichthys_crocea	ENSLCRP00005039200	38.0165	22.314
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.5805	20.5993	mastacembelus_armatus	ENSMAMP00000022157	36.6795	21.2355
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	35.0187	21.161	oryzias_javanicus	ENSOJAP00000038660	37.6258	22.7364
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	49.4382	32.5843	coturnix_japonica	ENSCJPP00005009823	40.3053	26.5649
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	49.6255	32.0225	anser_brachyrhynchus	ENSABRP00000021606	39.1433	25.2585
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	33.1461	20.9738	oryzias_sinensis	ENSOSIP00000043365	40.5963	25.6881
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	26.2172	16.1049	oryzias_sinensis	ENSOSIP00000005090	43.2099	26.5432
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	32.5843	19.1011	sander_lucioperca	ENSSLUP00000043264	40.3712	23.6659
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	34.4569	19.8502	pundamilia_nyererei	ENSPNYP00000005107	35.8674	20.6628
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	32.0225	19.1011	seriola_lalandi_dorsalis	ENSSLDP00000033325	40.0468	23.8876
ENSLLEG00000014682	leptobrachium_leishanense	ENSLLEP00000023178	32.5843	19.6629	myripristis_murdjan	ENSMMDP00005047883	35.0806	21.1694

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression