RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSLLEG00000002796	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	22796 bases	Strand	Plus strand
Position	2 : 97899631 - 97922426	RNA binding domain	eIF-1a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLLEP00000004345	eIF-1a	PF01176	1e-21	1
ENSLLEP00000004363	eIF-1a	PF01176	1.1e-21	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSLLET00000004542	588	144aa	ENSLLEP00000004345
-	ENSLLET00000004562	453	150aa	ENSLLEP00000004363

Gene Model

Click here to download ENSLLEG00000002796's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLLEG00000002796's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000017162	86.5546	85.7143	leptobrachium_leishanense	ENSLLEP00000004363	68.6667	68

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	74	63.3333	caenorhabditis_elegans	H06H21.3.1	51.3889	43.9815
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	80.6667	72.6667	drosophila_melanogaster	FBpp0310418	81.7568	73.6487
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	82.6667	71.3333	ciona_intestinalis	ENSCINP00000012877	65.9574	56.9149
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	88.6667	84.6667	eptatretus_burgeri	ENSEBUP00000012872	92.3611	88.1944
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92.6667	90.6667	callorhinchus_milii	ENSCMIP00000025201	82.2485	80.4734
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	88.6667	87.3333	carassius_auratus	ENSCARP00000090878	85.8064	84.5161
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	80.6667	79.3333	electrophorus_electricus	ENSEEEP00000036614	82.8767	81.5069
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	84.6667	81.3333	salmo_trutta	ENSSTUP00000010314	81.9355	78.7097
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	90.6667	gadus_morhua	ENSGMOP00000033070	69.898	69.3878
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	89.3333	cyclopterus_lumpus	ENSCLMP00005050055	82.5301	80.7229
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	chrysemys_picta_bellii	ENSCPBP00000007790	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	crocodylus_porosus	ENSCPRP00005005768	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	sphenodon_punctatus	ENSSPUP00000024147	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	notechis_scutatus	ENSNSUP00000016790	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	pseudonaja_textilis	ENSPTXP00000008852	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90	89.3333	meleagris_gallopavo	ENSMGAP00000015536	97.8261	97.1014
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	89.3333	serinus_canaria	ENSSCAP00000019862	88.961	87.013
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	60	60	notamacropus_eugenii	ENSMEUP00000009788	65.6934	65.6934
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92.6667	92.6667	sarcophilus_harrisii	ENSSHAP00000044325	83.7349	83.7349
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	90.6667	cercocebus_atys	ENSCATP00000019192	82.5301	81.9277
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	90.6667	mandrillus_leucophaeus	ENSMLEP00000014768	82.5301	81.9277
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	79.3333	78.6667	gorilla_gorilla	ENSGGOP00000029175	73.4568	72.8395
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	79.3333	78.6667	macaca_nemestrina	ENSMNEP00000023329	80.9524	80.2721
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	90.6667	pan_paniscus	ENSPPAP00000021708	83.4356	83.4356
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	86	84	ursus_americanus	ENSUAMP00000037145	78.1818	76.3636
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	91.3333	cricetulus_griseus_chok1gshd	ENSCGRP00001025183	82.5301	82.5301
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90	89.3333	pelodiscus_sinensis	ENSPSIP00000005212	94.4056	93.7063
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	82	81.3333	ursus_maritimus	ENSUMAP00000014631	75	74.3902
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	91.3333	microcebus_murinus	ENSMICP00000003745	86.7089	86.7089
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	naja_naja	ENSNNAP00000020009	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	80.6667	80	saimiri_boliviensis_boliviensis	ENSSBOP00000030774	73.7805	73.1707
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	94	90.6667	ictidomys_tridecemlineatus	ENSSTOP00000023869	78.3333	75.5556
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	89.3333	scophthalmus_maximus	ENSSMAP00000016056	81.4371	80.2395
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	59.3333	50.6667	ciona_savignyi	ENSCSAVP00000008325	60.9589	52.0548
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90	geospiza_fortis	ENSGFOP00000015759	95.1724	93.1034
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90	taeniopygia_guttata	ENSTGUP00000007742	41.5663	40.6627
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	90	cottoperca_gobio	ENSCGOP00000014135	88.8889	88.2353
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	90.6667	rhinopithecus_roxellana	ENSRROP00000038512	75.5556	75.5556
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	79.3333	78.6667	nomascus_leucogenys	ENSNLEP00000012082	73.4568	72.8395
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	89.3333	88	sinocyclocheilus_grahami	ENSSGRP00000072084	85.3503	84.0764
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	85.3333	83.3333	sinocyclocheilus_grahami	ENSSGRP00000060357	84.7682	82.7815
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	86.6667	83.3333	sinocyclocheilus_grahami	ENSSGRP00000062675	92.8571	89.2857
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	84.6667	81.3333	hucho_hucho	ENSHHUP00000084992	81.9355	78.7097
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	90	scleropages_formosus	ENSSFOP00015048791	76.8362	76.2712
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	chelonoidis_abingdonii	ENSCABP00000002122	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	89.3333	larimichthys_crocea	ENSLCRP00005036506	93.7931	92.4138
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	aquila_chrysaetos_chrysaetos	ENSACCP00020005644	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	gopherus_evgoodei	ENSGEVP00005003347	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	76	61.3333	saccharomyces_cerevisiae	YMR260C	74.5098	60.1307
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	strigops_habroptila	ENSSHBP00005021308	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	terrapene_carolina_triunguis	ENSTMTP00000006864	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	terrapene_carolina_triunguis	ENSTMTP00000017023	95.8333	94.4444
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	90.6667	90	struthio_camelus_australis	ENSSCUP00000010724	91.8919	91.2162
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	92	90.6667	prolemur_simus	ENSPSMP00000017893	80.2326	79.0698
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	89.3333	87.3333	cyprinus_carpio_carpio	ENSCCRP00000000122	88.7417	86.755
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	78	76	denticeps_clupeoides	ENSDCDP00000051031	78.5235	76.5101
ENSLLEG00000002796	leptobrachium_leishanense	ENSLLEP00000004363	91.3333	90.6667	myripristis_murdjan	ENSMMDP00005030493	91.9463	91.2752

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression