RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSLCRG00005015633	Gene ID	104933875	Accession	-
Symbol		Alias	-	Full Name	eukaryotic translation initiation factor 5A-1
Status	Confidence	Length	4933 bases	Strand	Plus strand
Position	JRPU02000062.1 : 144541 - 149473	RNA binding domain	eIF-5a
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLCRP00005040491	eIF-5a	PF01287	3.7e-26	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSLCRT00005041210	2060	156aa	ENSLCRP00005040491
-	ENSLCRT00005041211	1330	112aa	ENSLCRP00005040492

Gene Model

Click here to download ENSLCRG00005015633's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLCRG00005015633's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005011632	78.2051	61.5385	larimichthys_crocea	ENSLCRP00005040491	78.2051	61.5385

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	67.3077	58.9744	fundulus_heteroclitus	ENSFHEP00000005850	66.0377	57.8616
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	89.1026	poecilia_reticulata	ENSPREP00000016201	81.2834	74.3316
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	87.8205	78.2051	xiphophorus_maculatus	ENSXMAP00000027281	86.1635	76.7296
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.7179	91.6667	oryzias_latipes	ENSORLP00000043691	71.2963	66.2037
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	haplochromis_burtoni	ENSHBUP00000016956	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.1538	88.4615	cyclopterus_lumpus	ENSCLMP00005032920	96.1538	88.4615
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	88.4615	80.1282	oreochromis_niloticus	ENSONIP00000023864	87.8981	79.6178
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	81.4103	75.641	dicentrarchus_labrax	ENSDLAP00005024122	92.7007	86.1314
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	91.0256	cyprinodon_variegatus	ENSCVAP00000013032	97.4359	91.0256
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	85.8974	lates_calcarifer	ENSLCAP00010054516	90.4192	80.2395
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	astatotilapia_calliptera	ENSACLP00000033511	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	87.1795	75.641	takifugu_rubripes	ENSTRUP00000081023	84.472	73.2919
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.7436	81.4103	oryzias_melastigma	ENSOMEP00000005415	82.3529	74.7059
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	94.2308	89.7436	kryptolebias_marmoratus	ENSKMAP00000023594	94.2308	89.7436
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	89.1026	poecilia_latipinna	ENSPLAP00000008230	97.4359	89.1026
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	89.7436	cottoperca_gobio	ENSCGOP00000050912	75.3695	68.9655
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	89.1026	poecilia_formosa	ENSPFOP00000008694	97.4359	89.1026
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	91.0256	labrus_bergylta	ENSLBEP00000020255	69.9074	65.7407
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	94.8718	89.1026	gasterosteus_aculeatus	ENSGACP00000016695	84.0909	78.9773
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	amphilophus_citrinellus	ENSACIP00000022776	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	anabas_testudineus	ENSATEP00000031399	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	95.5128	82.6923	scophthalmus_maximus	ENSSMAP00000068261	95.5128	82.6923
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	92.3077	amphiprion_ocellaris	ENSAOCP00000021219	96.7949	92.3077
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	35.8974	33.9744	acanthochromis_polyacanthus	ENSAPOP00000031505	82.3529	77.9412
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	92.3077	acanthochromis_polyacanthus	ENSAPOP00000021237	97.4359	92.3077
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	97.4359	91.6667	stegastes_partitus	ENSSPAP00000022423	97.4359	91.6667
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	neolamprologus_brichardi	ENSNBRP00000012410	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	93.5897	85.2564	hippocampus_comes	ENSHCOP00000012090	93.5897	85.2564
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.7179	91.6667	oryzias_javanicus	ENSOJAP00000030856	98.7179	91.6667
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	88.4615	nothobranchius_furzeri	ENSNFUP00015049605	71.2264	65.0943
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	92.3077	amphiprion_percula	ENSAPEP00000005820	96.7949	92.3077
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	maylandia_zebra	ENSMZEP00005017534	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	96.7949	90.3846	betta_splendens	ENSBSLP00000048050	82.967	77.4725
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	94.8718	89.1026	sander_lucioperca	ENSSLUP00000058617	94.8718	89.1026
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.7179	91.6667	oryzias_sinensis	ENSOSIP00000000874	71.2963	66.2037
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	93.5897	82.6923	tetraodon_nigroviridis	ENSTNIP00000005114	93.5897	82.6923
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	91.6667	seriola_lalandi_dorsalis	ENSSLDP00000011823	98.0769	91.6667
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	91.0256	mastacembelus_armatus	ENSMAMP00000049769	90.5325	84.0237
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	92.9487	81.4103	cynoglossus_semilaevis	ENSCSEP00000024823	94.1558	82.4675
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	90.3846	pundamilia_nyererei	ENSPNYP00000017455	98.0769	90.3846
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	78.8462	56.4103	caenorhabditis_elegans	F54C9.1.2	76.3975	54.6584
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	75	51.2821	caenorhabditis_elegans	T05G5.10a.1	60	41.0256
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	98.0769	91.6667	seriola_dumerili	ENSSDUP00000004464	98.0769	91.6667
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	82.6923	61.5385	drosophila_melanogaster	FBpp0072082	81.1321	60.3774
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	85.8974	73.0769	oncorhynchus_kisutch	ENSOKIP00005113223	60.9091	51.8182
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.1026	77.5641	oncorhynchus_kisutch	ENSOKIP00005032815	88.535	77.0701
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	50.641	44.2308	oncorhynchus_mykiss	ENSOMYP00000060615	85.8696	75
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	90.3846	78.2051	oncorhynchus_mykiss	ENSOMYP00000010319	65.8878	57.0093
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	60.8974	53.2051	salmo_salar	ENSSSAP00000035935	89.6226	78.3019
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	90.3846	78.2051	salmo_salar	ENSSSAP00000089479	85.4545	73.9394
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.1026	77.5641	salmo_salar	ENSSSAP00000115527	84.7561	73.7805
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	42.3077	37.1795	salmo_trutta	ENSSTUP00000000949	92.9577	81.6901
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.1026	77.5641	salmo_trutta	ENSSTUP00000069324	84.7561	73.7805
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	90.3846	78.2051	salmo_trutta	ENSSTUP00000096501	89.8089	77.707
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	84.6154	66.6667	gadus_morhua	ENSGMOP00000036611	50.5747	39.8467
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	90.3846	78.2051	hucho_hucho	ENSHHUP00000005976	67.7885	58.6538
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.1026	77.5641	hucho_hucho	ENSHHUP00000034310	82.2485	71.5976
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	89.1026	77.5641	oncorhynchus_tshawytscha	ENSOTSP00005019442	62.6126	54.5045
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	90.3846	78.2051	oncorhynchus_tshawytscha	ENSOTSP00005077067	89.8089	77.707
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	85.8974	73.0769	oncorhynchus_tshawytscha	ENSOTSP00005093402	62.6168	53.271
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	79.4872	58.3333	saccharomyces_cerevisiae	YEL034W	78.9809	57.9618
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	80.1282	58.3333	saccharomyces_cerevisiae	YJR047C	79.6178	57.9618
ENSLCRG00005015633	larimichthys_crocea	ENSLCRP00005040491	91.0256	77.5641	myripristis_murdjan	ENSMMDP00005046646	91.6129	78.0645

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression