Description

Ensembl ID ENSLCOG00000013583 Gene ID 108506232 Accession -
Symbol Alias - Full Name trinucleotide repeat containing adaptor 6C
Status Confidence Length 54367 bases Strand Minus strand
Position KV388303.1 : 970978 - 1025344 RNA binding domain TNRC6-PABC_bdg , Ago_hook
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLCOP00000019207 TNRC6-PABC_bdg PF16608 4e-129 1
ENSLCOP00000019207 Ago_hook PF10427 3.1e-23 2
ENSLCOP00000019206 TNRC6-PABC_bdg PF16608 4e-129 1
ENSLCOP00000019206 Ago_hook PF10427 3.1e-23 2
ENSLCOP00000019204 TNRC6-PABC_bdg PF16608 4e-129 1
ENSLCOP00000019204 Ago_hook PF10427 1.4e-20 2
ENSLCOP00000019205 TNRC6-PABC_bdg PF16608 3.7e-107 1
ENSLCOP00000019205 TNRC6-PABC_bdg PF16608 3.7e-107 2
ENSLCOP00000019205 Ago_hook PF10427 3.9e-23 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLCOT00000020288 6782 1718aa ENSLCOP00000019204
- ENSLCOT00000020289 6770 1714aa ENSLCOP00000019205
- ENSLCOT00000020290 6740 1704aa ENSLCOP00000019206
- ENSLCOT00000020291 6737 1703aa ENSLCOP00000019207

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000013583

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000013583

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression