RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSLCOG00000011208	Gene ID	108501364	Accession	-
Symbol		Alias	-	Full Name	trinucleotide repeat containing adaptor 6A
Status	Confidence	Length	22797 bases	Strand	Minus strand
Position	KV388194.1 : 612371 - 635167	RNA binding domain	TNRC6-PABC_bdg , Ago_hook
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSLCOP00000015702	TNRC6-PABC_bdg	PF16608	1.3e-122	1
ENSLCOP00000015702	Ago_hook	PF10427	9.7e-15	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSLCOT00000016584	5767	1718aa	ENSLCOP00000015702

Gene Model

Click here to download ENSLCOG00000011208's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSLCOG00000011208's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLCOG00000011208

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSLCOG00000011208

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression