Description

Ensembl ID ENSLCOG00000011073 Gene ID 108506020 Accession -
Symbol Alias - Full Name pre-mRNA processing factor 8
Status Confidence Length 19117 bases Strand Plus strand
Position KV388296.1 : 890484 - 909600 RNA binding domain PROCT , PRP8_domainIV , PRO8NT , U6-snRNA_bdg , PROCN , RRM_4 , U5_2-snRNA_bdg
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLCOP00000015584 PROCT PF08084 1.1e-52 1
ENSLCOP00000015584 PRP8_domainIV PF12134 1.8e-129 2
ENSLCOP00000015584 U6-snRNA_bdg PF10596 2e-89 3
ENSLCOP00000015584 PROCN PF08083 1.3e-235 4
ENSLCOP00000015584 RRM_4 PF10598 4.1e-48 5
ENSLCOP00000015584 U5_2-snRNA_bdg PF10597 4e-73 6
ENSLCOP00000015525 PROCT PF08084 1.4e-52 1
ENSLCOP00000015525 PRP8_domainIV PF12134 2.2e-129 2
ENSLCOP00000015525 PRO8NT PF08082 5e-86 3
ENSLCOP00000015525 U6-snRNA_bdg PF10596 2.5e-89 4
ENSLCOP00000015525 PROCN PF08083 1.6e-235 5
ENSLCOP00000015525 RRM_4 PF10598 5.1e-48 6
ENSLCOP00000015525 U5_2-snRNA_bdg PF10597 4.8e-73 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLCOT00000016398 7008 2335aa ENSLCOP00000015525
- ENSLCOT00000016458 7102 2011aa ENSLCOP00000015584

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000011073

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000011073

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression