Description

Ensembl ID ENSLCOG00000006620 Gene ID 108503565 Accession -
Symbol Alias - Full Name trinucleotide repeat containing adaptor 6B
Status Confidence Length 72862 bases Strand Minus strand
Position KV388234.1 : 2124282 - 2197143 RNA binding domain TNRC6-PABC_bdg , Ago_hook
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLCOP00000009034 TNRC6-PABC_bdg PF16608 2.2e-101 1
ENSLCOP00000009034 Ago_hook PF10427 3e-16 2
ENSLCOP00000009037 TNRC6-PABC_bdg PF16608 7.9e-93 1
ENSLCOP00000009037 TNRC6-PABC_bdg PF16608 7.9e-93 2
ENSLCOP00000009037 Ago_hook PF10427 4.3e-16 3
ENSLCOP00000009031 TNRC6-PABC_bdg PF16608 8.6e-93 1
ENSLCOP00000009031 TNRC6-PABC_bdg PF16608 8.6e-93 2
ENSLCOP00000009031 Ago_hook PF10427 1.9e-16 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLCOT00000009607 5654 1797aa ENSLCOP00000009031
- ENSLCOT00000009610 5570 1769aa ENSLCOP00000009034
- ENSLCOT00000009613 5528 1755aa ENSLCOP00000009037

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000006620

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCOG00000006620

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression