Description

Ensembl ID ENSLCAG00010012822 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10637 bases Strand Minus strand
Position CYIF01000341.1 : 481095 - 491731 RNA binding domain PPR_3
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLCAP00010027311 PPR_3 PF13812 5.2e-08 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLCAT00010027892 1866 552aa ENSLCAP00010027311

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCAG00010012822

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.94252.8986poecilia_reticulataENSPREP0000000529025.615820.5489
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.572553.0797cyclopterus_lumpusENSCLMP0000504928225.956920.3897
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.391351.4493oreochromis_niloticusENSONIP0000000116125.306119.3197
ENSLCAG00010012822lates_calcariferENSLCAP0001002731166.847851.4493haplochromis_burtoniENSHBUP0000002913325.32619.4921
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.036249.4565sparus_aurataENSSAUP0001005977324.947918.9715
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.398652.1739cottoperca_gobioENSCGOP0000005071725.368920.2389
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.768145.471dicentrarchus_labraxENSDLAP0000505453325.214917.9799
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.579748.0072kryptolebias_marmoratusENSKMAP0000000431122.019516.1192
ENSLCAG00010012822lates_calcariferENSLCAP0001002731164.855149.8188nothobranchius_furzeriENSNFUP0001500472826.538220.3855
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.420342.3913cynoglossus_semilaevisENSCSEP0000000600223.750916.9442
ENSLCAG00010012822lates_calcariferENSLCAP0001002731164.673950.5435takifugu_rubripesENSTRUP0000002105924.96519.5105
ENSLCAG00010012822lates_calcariferENSLCAP0001002731169.021756.1594seriola_dumeriliENSSDUP0000002629326.66221.6935
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.391355.6159sander_luciopercaENSSLUP0000003799625.941421.4086
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.760950.9058oryzias_javanicusENSOJAP0000002853425.671919.8727
ENSLCAG00010012822lates_calcariferENSLCAP0001002731164.673949.8188hippocampus_comesENSHCOP0000000118125.888319.942
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.94252.7174poecilia_latipinnaENSPLAP0000002078925.77920.6091
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.391353.2609acanthochromis_polyacanthusENSAPOP0000003020626.08720.6171
ENSLCAG00010012822lates_calcariferENSLCAP0001002731168.115952.3551labrus_bergyltaENSLBEP0000003095127.445321.0949
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.02950.5435betta_splendensENSBSLP0000005344425.892219.5241
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.043553.2609seriola_lalandi_dorsalisENSSLDP0000002993227.996823.6525
ENSLCAG00010012822lates_calcariferENSLCAP0001002731166.485551.9928larimichthys_croceaENSLCRP0000501902725.521619.9583
ENSLCAG00010012822lates_calcariferENSLCAP0001002731167.391352.5362anabas_testudineusENSATEP0000006015626.178720.4082
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.405851.087mastacembelus_armatusENSMAMP0000003628926.099921.0291
ENSLCAG00010012822lates_calcariferENSLCAP0001002731165.217452.1739scophthalmus_maximusENSSMAP0000004686425.263220.2105
ENSLCAG00010012822lates_calcariferENSLCAP0001002731133.514517.7536drosophila_melanogasterFBpp007022117.25759.14179
ENSLCAG00010012822lates_calcariferENSLCAP0001002731160.869642.7536callorhinchus_miliiENSCMIP0000000910123.414616.446
ENSLCAG00010012822lates_calcariferENSLCAP0001002731164.492846.558clupea_harengusENSCHAP000000424842518.0478
ENSLCAG00010012822lates_calcariferENSLCAP0001002731162.862345.8333carassius_auratusENSCARP0000004972323.980617.4845
ENSLCAG00010012822lates_calcariferENSLCAP0001002731138.768127.8986carassius_auratusENSCARP0000004160554.040438.8889
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797140.2174astyanax_mexicanusENSAMXP0000000434459.459542.8571
ENSLCAG00010012822lates_calcariferENSLCAP0001002731162.862345.8333ictalurus_punctatusENSIPUP0000001374623.997217.4965
ENSLCAG00010012822lates_calcariferENSLCAP0001002731161.594245.471electrophorus_electricusENSEEEP0000001500623.627517.4427
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.05844.9275esox_luciusENSELUP0000005362023.571917.932
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.949347.6449oncorhynchus_kisutchENSOKIP0000503968624.261218.0756
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.768147.4638oncorhynchus_mykissENSOMYP0000005788324.192418.0069
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.405847.4638salmo_salarENSSSAP0000014589823.858217.8596
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.58747.2826salmo_truttaENSSTUP0000001653524.123717.9381
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.601445.6522gadus_morhuaENSGMOP0000004171322.320217.0963
ENSLCAG00010012822lates_calcariferENSLCAP0001002731151.08734.4203laticauda_laticaudataENSLLTP0000000619021.234914.3072
ENSLCAG00010012822lates_calcariferENSLCAP0001002731151.811634.4203serinus_canariaENSSCAP0000001411222.44914.9137
ENSLCAG00010012822lates_calcariferENSLCAP0001002731153.804336.413notechis_scutatusENSNSUP0000001997221.568614.5969
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521738.9493ornithorhynchus_anatinusENSOANP0000002312222.222215.3134
ENSLCAG00010012822lates_calcariferENSLCAP0001002731141.304327.5362sphenodon_punctatusENSSPUP0000000674018.269212.1795
ENSLCAG00010012822lates_calcariferENSLCAP000100273115.79713.44203anas_platyrhynchos_platyrhynchosENSAPLP000000086853.733962.21704
ENSLCAG00010012822lates_calcariferENSLCAP0001002731123.007216.3043anas_platyrhynchos_platyrhynchosENSAPLP0000002070259.624442.2535
ENSLCAG00010012822lates_calcariferENSLCAP0001002731145.108732.2464gorilla_gorillaENSGGOP0000005157261.179443.7346
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.065241.1232sarcophilus_harrisiiENSSHAP0000004367421.169415.2554
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797140.0362delphinapterus_leucasENSDLEP0000000458522.126415.8764
ENSLCAG00010012822lates_calcariferENSLCAP0001002731148.731932.2464pseudonaja_textilisENSPTXP0000000173122.472814.8705
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.434839.6739mesocricetus_auratusENSMAUP0000001161621.982815.7328
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.347836.0507gallus_gallusENSGALP0001002910821.156614.0339
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.942canis_lupus_familiarisENSCAFP0084503613022.756616.224
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.065240.3986pongo_abeliiENSPPYP0000002477222.596815.9971
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.615939.8551oryctolagus_cuniculusENSOCUP0000001293921.070715.0995
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521739.3116pan_paniscusENSPPAP0000003635022.478415.634
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.5797panthera_leoENSPLOP0000001370422.740316.0689
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702940.942physeter_catodonENSPCTP0000501287722.088915.9492
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.434839.3116callithrix_jacchusENSCJAP0000000141821.841515.4889
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.340640.3986papio_anubisENSPANP0000000640221.286815.2635
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.05841.3043xenopus_tropicalisENSXETP0000002043523.436416.3911
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797139.6739bos_indicus_hybridENSBIXP0000504009222.697116.1385
ENSLCAG00010012822lates_calcariferENSLCAP0001002731132.246423.0072notamacropus_eugeniiENSMEUP0000000405913.90629.92188
ENSLCAG00010012822lates_calcariferENSLCAP0001002731153.985538.2246mus_musculusENSMUSP0000010792721.40815.158
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521740.2174sus_scrofaENSSSCP0000000902022.222215.812
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.340638.9493chrysemys_picta_belliiENSCPBP0000000691922.26215.3901
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.884141.1232camelus_dromedariusENSCDRP0000503218422.541316.2958
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159440.0362urocitellus_parryiiENSUPAP0001002630022.254115.865
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.536235.8696naja_najaENSNNAP0000000094226.032317.7738
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.942bison_bison_bisonENSBBBP0000002104022.740316.2123
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.717434.6014taeniopygia_guttataENSTGUP0000000389621.256413.9518
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.246440.942vulpes_vulpesENSVVUP0000000650122.619916.1775
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.710138.587rattus_norvegicusENSRNOP0000000820021.602315.2361
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.717436.0507meleagris_gallopavoENSMGAP0000001058423.354715.9711
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521737.5salvator_merianaeENSSMRP0000002386222.397714.86
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.340640.7609macaca_fascicularisENSMFAP0000004186421.286815.4004
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.246440.3986felis_catusENSFCAP0000001249122.668615.9971
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.978338.9493dipodomys_ordiiENSDORP0000001150422.182315.4343
ENSLCAG00010012822lates_calcariferENSLCAP0001002731153.804337.8623mus_spicilegusENSMSIP0000001302321.397715.0576
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.340640.5797balaenoptera_musculusENSBMSP0001001700322.34216.092
ENSLCAG00010012822lates_calcariferENSLCAP0001002731150.543535.3261equus_asinusENSEASP0000500667221.362914.9311
ENSLCAG00010012822lates_calcariferENSLCAP0001002731149.456531.3406crocodylus_porosusENSCPRP0000502210520.103112.7393
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.884140.7609monodelphis_domesticaENSMODP0000000077522.364716.0256
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.978340.2174sciurus_vulgarisENSSVLP0000503107722.150515.914
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159440.0362podarcis_muralisENSPMRP0000003148623.014116.4068
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.536232.7899parus_majorENSPMJP0000001936522.103713.7957
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.253637.6812struthio_camelus_australisENSSCUP0000000902922.32815.2269
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.065239.6739chelonoidis_abingdoniiENSCABP0000002086925.039717.4086
ENSLCAG00010012822lates_calcariferENSLCAP0001002731128.260921.9203tupaia_belangeriENSTBEP0000000962311.15888.65522
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.239144.7464hucho_huchoENSHHUP0000005402623.747317.9375
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159440.0362aotus_nancymaaeENSANAP0000001933822.127115.7744
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.608740.3986gopherus_evgoodeiENSGEVP0000500941822.730515.94
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159439.6739propithecus_coquereliENSPCOP0000000052622.366515.8009
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521740.942ursus_americanusENSUAMP0000002984222.365616.2007
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.434838.4058leptobrachium_leishanenseENSLLEP0000001072521.919815.1862
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521739.4928pan_troglodytesENSPTRP0000008067522.381615.6385
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.5797rhinolophus_ferrumequinumENSRFEP0001000956722.756616.0804
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702940.0362catagonus_wagneriENSCWAP0000002452022.437315.8423
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.615939.1304nannospalax_galiliENSNGAP0000001082922.02315.495
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.246440.3986panthera_pardusENSPPRP0000001332822.668615.9971
ENSLCAG00010012822lates_calcariferENSLCAP0001002731163.224647.4638pygocentrus_nattereriENSPNAP0000000805024.422718.3345
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159440.3986peromyscus_maniculatus_bairdiiENSPEMP0000002669522.382716.1011
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.942canis_lupus_dingoENSCAFP0002003379322.691516.1775
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.978340.2174cebus_imitatorENSCCAP0000002803222.150515.914
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.789940.5797paramormyrops_kingsleyaeENSPKIP0000000574625.725818.0645
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.891338.587mus_caroliMGP_CAROLIEiJ_P004575521.767215.3017
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.615939.8551prolemur_simusENSPSMP0000001149621.991415.7593
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.246440.942ailuropoda_melanoleucaENSAMEP0000000618022.652316.2007
ENSLCAG00010012822lates_calcariferENSLCAP0001002731161.594246.0145oncorhynchus_tshawytschaENSOTSP0000502570727.070120.2229
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521739.6739homo_sapiensENSP0000026066522.381615.7102
ENSLCAG00010012822lates_calcariferENSLCAP0001002731153.985538.2246mus_spretusMGP_SPRETEiJ_P004767621.40815.158
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797139.8551marmota_marmota_marmotaENSMMMP0000001810522.031515.7368
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.340640.5797moschus_moschiferusENSMMSP0000001504922.309916.0689
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.963843.4783scleropages_formosusENSSFOP0001500145622.874916.586
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.884140.5797ovis_aries_rambouilletENSOARP0002000810422.525116.0689
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.615939.6739monodon_monocerosENSMMNP0001501868322.02315.7102
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.246441.3043vombatus_ursinusENSVURP0001002152422.507116.2393
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702940.7609neovison_visonENSNVIP0000002121422.437316.129
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.710138.7681mus_pahariMGP_PahariEiJ_P004526921.695415.3736
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.434836.9565strigops_habroptilaENSSHBP0000501612622.335814.8905
ENSLCAG00010012822lates_calcariferENSLCAP0001002731161.775443.8406denticeps_clupeoidesENSDCDP0000002531723.997217.0303
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159440.5797macaca_mulattaENSMMUP0000004503722.190416.0344
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427541.1232bos_taurusENSBTAP0000002177322.789416.3192
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427541.3043bos_grunniensENSBGRP0000000877122.740316.3558
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.427540.942phascolarctos_cinereusENSPCIP0000000830222.562316.0854
ENSLCAG00010012822lates_calcariferENSLCAP0001002731148.369632.0652anser_brachyrhynchusENSABRP0000000591821.445814.2169
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.710137.5jaculus_jaculusENSJJAP0000001956621.805114.9458
ENSLCAG00010012822lates_calcariferENSLCAP0001002731160.326144.0217cyprinus_carpio_carpioENSCCRP0000016046923.600317.2218
ENSLCAG00010012822lates_calcariferENSLCAP0001002731162.862345.6522cyprinus_carpio_carpioENSCCRP0000016996624.013817.4394
ENSLCAG00010012822lates_calcariferENSLCAP0001002731159.05841.1232erpetoichthys_calabaricusENSECRP0000002430823.691916.4971
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.521740.0362equus_caballusENSECAP0000002124222.625116.0261
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.608741.1232bos_mutusENSBMUP0000000844222.812116.2841
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797138.0435aquila_chrysaetos_chrysaetosENSACCP0002001460622.465415.3173
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702940.7609mandrillus_leucophaeusENSMLEP0000003927922.405216.1059
ENSLCAG00010012822lates_calcariferENSLCAP0001002731164.311651.087myripristis_murdjanENSMMDP0000502725024.669919.5969
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.898634.9638geospiza_fortisENSGFOP0000000887421.872714.4569
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.065240.5797rhinopithecus_bietiENSRBIP0000001489722.483915.9886
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702939.1304octodon_degusENSODEP0000001518222.485615.5172
ENSLCAG00010012822lates_calcariferENSLCAP0001002731153.985535.3261coturnix_japonicaENSCJPP0000501182723.669615.4885
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.884140.942cervus_hanglu_yarkandensisENSCHYP0000002163122.525116.2123
ENSLCAG00010012822lates_calcariferENSLCAP0001002731152.717437.8623rhinopithecus_roxellanaENSRROP0000003887154.802339.3597
ENSLCAG00010012822lates_calcariferENSLCAP000100273117.971014.8913rhinopithecus_roxellanaENSRROP000000291378.208955.03731
ENSLCAG00010012822lates_calcariferENSLCAP0001002731157.608740.3986anolis_carolinensisENSACAP0000002216222.569215.8268
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.978340.2174phocoena_sinusENSPSNP0000000825822.166415.9254
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.797139.4928saimiri_boliviensis_boliviensisENSSBOP0000000229022.078915.6272
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.159437.6812heterocephalus_glaber_femaleENSHGLP0000000847522.238214.9211
ENSLCAG00010012822lates_calcariferENSLCAP0001002731160.507243.8406sinocyclocheilus_grahamiENSSGRP0000004702529.068821.0618
ENSLCAG00010012822lates_calcariferENSLCAP0001002731160.869645.2899sinocyclocheilus_grahamiENSSGRP0000001658624.017217.8699
ENSLCAG00010012822lates_calcariferENSLCAP0001002731155.978339.4928microcebus_murinusENSMICP0000000957922.150515.6272
ENSLCAG00010012822lates_calcariferENSLCAP0001002731154.52938.2246carlito_syrichtaENSTSYP0000001210821.592515.1363
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.702940.942ursus_maritimusENSUMAP0000001743722.437316.2007
ENSLCAG00010012822lates_calcariferENSLCAP0001002731151.992834.2391ficedula_albicollisENSFALP0000001329421.498114.1573
ENSLCAG00010012822lates_calcariferENSLCAP0001002731156.884140.2174terrapene_carolina_triunguisENSTMTP0000000651922.476715.8912

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression