| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSLACG00000018380 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2593 bases |
Strand |
Minus strand |
| Position |
JH126600.1 : 3150975 - 3153567 |
RNA binding domain |
RNase_H , RVT_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSLACP00000020921 |
RNase_H |
PF00075 |
2e-09 |
1 |
| ENSLACP00000020919 |
RVT_1 |
PF00078 |
4.2e-26 |
1 |
| ENSLACP00000020920 |
RVT_1 |
PF00078 |
2.9e-24 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSLACT00000021059 |
2064 |
688aa |
ENSLACP00000020919 |
| - |
ENSLACT00000021060 |
1908 |
636aa |
ENSLACP00000020920 |
| - |
ENSLACT00000021061 |
1548 |
516aa |
ENSLACP00000020921 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000004884 | 64.3909 | 55.6894 | latimeria_chalumnae | ENSLACP00000020919 | 69.9128 | 60.4651 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000009485 | 78.6284 | 69.059 | latimeria_chalumnae | ENSLACP00000020919 | 71.657 | 62.936 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000000795 | 82.1596 | 73.7089 | latimeria_chalumnae | ENSLACP00000020919 | 25.436 | 22.8198 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000005323 | 49.8507 | 34.3284 | latimeria_chalumnae | ENSLACP00000020919 | 24.2733 | 16.7151 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002979 | 43.2668 | 30.6733 | latimeria_chalumnae | ENSLACP00000020919 | 50.436 | 35.7558 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002808 | 51.0791 | 36.1511 | latimeria_chalumnae | ENSLACP00000020919 | 41.2791 | 29.2151 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000010231 | 42.9878 | 31.25 | latimeria_chalumnae | ENSLACP00000020919 | 40.9884 | 29.7965 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000012795 | 46.9676 | 32.5811 | latimeria_chalumnae | ENSLACP00000020919 | 48.4012 | 33.5756 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000005634 | 47.7519 | 34.5736 | latimeria_chalumnae | ENSLACP00000020919 | 44.7674 | 32.4128 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000016456 | 38.7097 | 27.8802 | latimeria_chalumnae | ENSLACP00000020919 | 24.4186 | 17.5872 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000019305 | 39.8335 | 27.5862 | latimeria_chalumnae | ENSLACP00000020919 | 48.6919 | 33.7209 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000000035 | 34.4444 | 21.6667 | latimeria_chalumnae | ENSLACP00000020919 | 18.0233 | 11.3372 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000013794 | 38.4365 | 27.1987 | latimeria_chalumnae | ENSLACP00000020919 | 34.3023 | 24.2733 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000001097 | 57.7273 | 37.7273 | latimeria_chalumnae | ENSLACP00000020919 | 18.4593 | 12.064 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000017661 | 44 | 28.4444 | latimeria_chalumnae | ENSLACP00000020919 | 43.1686 | 27.907 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000001321 | 20.8914 | 11.5599 | latimeria_chalumnae | ENSLACP00000020919 | 21.8023 | 12.064 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000005457 | 22.7523 | 13.1193 | latimeria_chalumnae | ENSLACP00000020919 | 36.0465 | 20.7849 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000011620 | 42.3729 | 25.8475 | latimeria_chalumnae | ENSLACP00000020919 | 14.5349 | 8.86628 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000011782 | 52.9167 | 32.5 | latimeria_chalumnae | ENSLACP00000020919 | 18.4593 | 11.3372 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002429 | 21.8094 | 12.1163 | latimeria_chalumnae | ENSLACP00000020919 | 19.6221 | 10.9012 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000004071 | 23.7754 | 14.098 | latimeria_chalumnae | ENSLACP00000020919 | 28.9244 | 17.1512 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002702 | 21.519 | 12.074 | latimeria_chalumnae | ENSLACP00000020919 | 32.1221 | 18.0233 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000009473 | 19.6172 | 9.40989 | latimeria_chalumnae | ENSLACP00000020919 | 17.8779 | 8.57558 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000007945 | 41.954 | 22.9885 | latimeria_chalumnae | ENSLACP00000020919 | 10.6105 | 5.81395 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002051 | 24.1611 | 13.8063 | latimeria_chalumnae | ENSLACP00000020919 | 36.6279 | 20.9302 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000012244 | 25.4448 | 14.7687 | latimeria_chalumnae | ENSLACP00000020919 | 20.7849 | 12.064 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000019900 | 30.4085 | 16.944 | latimeria_chalumnae | ENSLACP00000020919 | 29.2151 | 16.2791 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000004387 | 39.9317 | 25.9386 | latimeria_chalumnae | ENSLACP00000020919 | 17.0058 | 11.0465 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002116 | 37.1601 | 20.5438 | latimeria_chalumnae | ENSLACP00000020919 | 17.8779 | 9.88372 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000019495 | 17.3203 | 9.47712 | latimeria_chalumnae | ENSLACP00000020919 | 15.407 | 8.43023 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000010406 | 22.9391 | 12.6643 | latimeria_chalumnae | ENSLACP00000020919 | 27.907 | 15.407 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000002519 | 37.0229 | 20.229 | latimeria_chalumnae | ENSLACP00000020919 | 14.0988 | 7.70349 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000005414 | 25.0251 | 13.9698 | latimeria_chalumnae | ENSLACP00000020919 | 36.1919 | 20.2035 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000008866 | 34.2368 | 20.8274 | latimeria_chalumnae | ENSLACP00000020919 | 34.8837 | 21.2209 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000005547 | 35.124 | 20.2479 | latimeria_chalumnae | ENSLACP00000020919 | 12.3547 | 7.12209 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000007231 | 35.5072 | 21.5942 | latimeria_chalumnae | ENSLACP00000020919 | 35.6105 | 21.657 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000016571 | 36.0215 | 23.1183 | latimeria_chalumnae | ENSLACP00000020919 | 9.73837 | 6.25 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000006931 | 30.7398 | 18.4949 | latimeria_chalumnae | ENSLACP00000020919 | 35.0291 | 21.0756 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000000275 | 34.4538 | 20.1681 | latimeria_chalumnae | ENSLACP00000020919 | 23.8372 | 13.9535 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000004485 | 31.7967 | 19.2671 | latimeria_chalumnae | ENSLACP00000020919 | 39.0988 | 23.6919 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000014145 | 29.0456 | 18.6722 | latimeria_chalumnae | ENSLACP00000020919 | 10.1744 | 6.5407 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000010820 | 31.7497 | 19.0035 | latimeria_chalumnae | ENSLACP00000020919 | 39.8256 | 23.8372 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000010610 | 36.2013 | 21.4286 | latimeria_chalumnae | ENSLACP00000020919 | 32.4128 | 19.186 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000009581 | 34.1033 | 19.7011 | latimeria_chalumnae | ENSLACP00000020919 | 36.4826 | 21.0756 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000013755 | 38.6447 | 22.1612 | latimeria_chalumnae | ENSLACP00000020919 | 30.6686 | 17.5872 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000016993 | 29.6736 | 18.8427 | latimeria_chalumnae | ENSLACP00000020919 | 29.0698 | 18.4593 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000017258 | 22.9803 | 13.6445 | latimeria_chalumnae | ENSLACP00000020919 | 18.6047 | 11.0465 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000006276 | 17.7046 | 10.1423 | latimeria_chalumnae | ENSLACP00000020919 | 28.9244 | 16.5698 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000018671 | 36.0284 | 22.1277 | latimeria_chalumnae | ENSLACP00000020919 | 36.9186 | 22.6744 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000006436 | 17.9104 | 10.6965 | latimeria_chalumnae | ENSLACP00000020919 | 31.3953 | 18.75 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000008499 | 37.0016 | 21.3716 | latimeria_chalumnae | ENSLACP00000020919 | 33.7209 | 19.4767 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000011415 | 31.432 | 18.2039 | latimeria_chalumnae | ENSLACP00000020919 | 37.6453 | 21.8023 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 35.4651 | 22.093 | ciona_intestinalis | ENSCINP00000032038 | 30.0493 | 18.7192 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 36.6279 | 22.8198 | ciona_intestinalis | ENSCINP00000031157 | 24.1843 | 15.0672 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 35.7558 | 22.8198 | ciona_intestinalis | ENSCINP00000033452 | 28.7383 | 18.3411 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 38.9535 | 20.7849 | gallus_gallus | ENSGALP00010013991 | 30.2825 | 16.1582 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 37.2093 | 21.8023 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000031382 | 30.7692 | 18.0288 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 36.0465 | 21.3663 | tetraodon_nigroviridis | ENSTNIP00000009609 | 17.8161 | 10.5603 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 39.3895 | 21.2209 | meleagris_gallopavo | ENSMGAP00000020585 | 30.7256 | 16.5533 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 38.8081 | 21.5116 | coturnix_japonica | ENSCJPP00005015722 | 27.5542 | 15.2735 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 41.5698 | 25 | aquila_chrysaetos_chrysaetos | ENSACCP00020008910 | 30.5229 | 18.3565 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 16.2791 | 7.99419 | ciona_savignyi | ENSCSAVP00000002754 | 32.4638 | 15.942 |
| ENSLACG00000018380 | latimeria_chalumnae | ENSLACP00000020919 | 28.7791 | 17.5872 | pelodiscus_sinensis | ENSPSIP00000001133 | 40.4908 | 24.7444 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
