Description

Ensembl ID ENSLACG00000018255 Gene ID 102353437 Accession -
Symbol calr3b Alias - Full Name calreticulin 3
Status Confidence Length 14087 bases Strand Plus strand
Position JH126613.1 : 2945501 - 2959587 RNA binding domain Calreticulin
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSLACP00000020781 Calreticulin PF00262 6.4e-82 1
ENSLACP00000020781 Calreticulin PF00262 6.4e-82 2
ENSLACP00000020782 Calreticulin PF00262 7.1e-82 1
ENSLACP00000020782 Calreticulin PF00262 7.1e-82 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSLACT00000020921 3185 408aa ENSLACP00000020781
- ENSLACT00000020922 1248 416aa ENSLACP00000020782

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLACG00000018255latimeria_chalumnaeENSLACP0000000192079.666771.6667latimeria_chalumnaeENSLACP0000002078257.451951.6827
ENSLACG00000018255latimeria_chalumnaeENSLACP0000001273240.1626.4latimeria_chalumnaeENSLACP0000002078260.336539.6635
ENSLACG00000018255latimeria_chalumnaeENSLACP0000000271039.095325.6866latimeria_chalumnaeENSLACP0000002078258.173138.2212

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078273.557759.375caenorhabditis_elegansY38A10A.5.177.468462.5316
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.490463.9423petromyzon_marinusENSPMAP0000000302179.391162.2951
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.173175.2404callorhinchus_miliiENSCMIP0000004420083.373575.4217
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.096275.4808xiphophorus_maculatusENSXMAP0000003468379.372270.4036
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615475.2404electrophorus_electricusENSEEEP0000000043384.009574.7017
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.37572.8365sparus_aurataENSSAUP0001005727883.372971.9715
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336575.7212sparus_aurataENSSAUP0001006760779.596470.6278
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.298174.0385lates_calcariferENSLCAP0001002897783.101971.2963
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.057776.4423lates_calcariferENSLCAP0001003632284.235374.8235
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078279.807770.1923astyanax_mexicanusENSAMXP0000002228385.128274.8718
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336575.4808astyanax_mexicanusENSAMXP0000001556183.924374.2317
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894271.3942haplochromis_burtoniENSHBUP0000000623582.701470.3792
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576976.9231haplochromis_burtoniENSHBUP0000002891184.560676.0095
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078288.221275.7212ictalurus_punctatusENSIPUP0000003738186.761274.4681
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975ictalurus_punctatusENSIPUP0000000784583.962373.5849
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.855875.4808poecilia_reticulataENSPREP0000001819884.449875.1196
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.2788oncorhynchus_mykissENSOMYP0000000438483.69374.1007
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078278.605869.7115oncorhynchus_mykissENSOMYP0000001372842.745137.9085
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894272.8365oncorhynchus_mykissENSOMYP0000005074982.701471.8009
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.37575fundulus_heteroclitusENSFHEP0000002686484.172774.8201
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078288.701979.8077lepisosteus_oculatusENSLOCP0000000443886.619777.9343
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692370.9135astatotilapia_callipteraENSACLP0000002894083.091871.256
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576976.9231astatotilapia_callipteraENSACLP0000001570284.360275.8294
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653873.5577cyclopterus_lumpusENSCLMP0000504170682.075572.1698
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615470.9135clupea_harengusENSCHAP0000000463379.63866.7421
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615475.2404takifugu_rubripesENSTRUP0000002406582.823573.6471
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.0385salmo_salarENSSSAP0000014067675.215566.3793
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.413573.5577salmo_salarENSSSAP0000000657983.413573.5577
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.2570.9135salmo_salarENSSSAP0000006569480.28570.0713
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615474.0385seriola_dumeriliENSSDUP0000002654584.210573.6842
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975.9615seriola_dumeriliENSSDUP0000001434584.560675.0594
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.134674.2788esox_luciusENSELUP0000001402484.134674.2788
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817375.2404esox_luciusENSELUP000000529878574.5238
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336572.3558dicentrarchus_labraxENSDLAP0000503444283.138270.4918
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078244.951927.8846saccharomyces_cerevisiaeYAL058W37.25123.1076
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078217.548116.5865tetraodon_nigroviridisENSTNIP0000001794493.589788.4615
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.096275.9615poecilia_latipinnaENSPLAP0000000331885.301276.1446
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336574.7596scophthalmus_maximusENSSMAP0000004126983.726473.3491
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.971274.2788poecilia_formosaENSPFOP0000000215686.989878.8265
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078280.048170.1923neolamprologus_brichardiENSNBRP0000002640078.9169.1943
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576977.1635neolamprologus_brichardiENSNBRP0000001605684.160875.8865
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.134675.4808carassius_auratusENSCARP0000004911179.726771.5262
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078287.576.2019carassius_auratusENSCARP0000012777486.05274.9409
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078287.576.2019carassius_auratusENSCARP0000009801786.05274.9409
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.096276.6827carassius_auratusENSCARP0000008266884.486976.1337
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.413574.2788carassius_auratusENSCARP0000008324183.213474.1007
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078269.711559.1346carassius_auratusENSCARP0000008493979.889867.7686
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653874.2788amphilophus_citrinellusENSACIP0000001029185.085675.5501
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.298175.7212cyprinodon_variegatusENSCVAP0000001484585.273274.8219
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653874.0385oncorhynchus_tshawytschaENSOTSP0000503756482.857173.3333
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894273.0769oncorhynchus_tshawytschaENSOTSP0000506661081.162870.6977
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078278.605869.7115oncorhynchus_tshawytschaENSOTSP0000506461447.322741.9682
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615475.4808nothobranchius_furzeriENSNFUP0001501024380.182271.5262
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336577.1635oreochromis_niloticusENSONIP0000007365582.750674.8252
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653872.1154oreochromis_niloticusENSONIP0000000966182.464571.09
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.855875.7212labrus_bergyltaENSLBEP0000002246884.652375.5396
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336573.5577labrus_bergyltaENSLBEP0000001887184.32372.6841
ENSLACG00000018255latimeria_chalumnaeENSLACP000000207827567.0673sander_luciopercaENSSLUP0000000187384.09775.2022
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.490472.1154salmo_truttaENSSTUP0000010367983.292473.7101
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.2788salmo_truttaENSSTUP0000000748682.897973.3967
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.490471.3942salmo_truttaENSSTUP0000006959746.88841.0788
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078274.278858.4135hippocampus_comesENSHCOP0000000707476.108459.8522
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.855874.0385hippocampus_comesENSHCOP0000000149084.855874.0385
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.057777.6442amphiprion_perculaENSAPEP0000003169683.840875.644
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.298175.2404amphiprion_perculaENSAPEP0000002925784.470673.6471
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078273.076964.6635oryzias_melastigmaENSOMEP0000002915383.060173.4973
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.173170.6731oryzias_melastigmaENSOMEP0000000683883.574971.0145
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692371.1538oryzias_latipesENSORLP0000000365282.891671.3253
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615474.7596oryzias_latipesENSORLP0000002255285.436975.4854
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817373.0769paramormyrops_kingsleyaeENSPKIP0000001264186.650573.7864
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975paramormyrops_kingsleyaeENSPKIP0000002873685.783175.1807
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078217.307713.9423oryzias_sinensisENSOSIP0000002688176.595761.7021
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.37575oryzias_sinensisENSOSIP0000004046685.194275.7282
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078254.807747.8365oryzias_sinensisENSOSIP0000003640881.428671.0714
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817377.1635maylandia_zebraENSMZEP0000503278584.397275.8865
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692371.1538maylandia_zebraENSMZEP0000502415883.091871.4976
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.413572.1154gadus_morhuaENSGMOP0000000931281.455470.4225
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653873.0769gadus_morhuaENSGMOP0000001338882.075571.6981
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.855875.7212larimichthys_croceaENSLCRP0000503013781.336472.5806
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.37573.7981larimichthys_croceaENSLCRP0000502431182.978772.5768
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078278.365471.875erpetoichthys_calabaricusENSECRP0000003136682.115975.3149
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078276.201967.7885seriola_lalandi_dorsalisENSSLDP0000001573076.941768.4466
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975.9615seriola_lalandi_dorsalisENSSLDP0000001259084.560675.0594
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078222.836517.7885acanthochromis_polyacanthusENSAPOP0000002975366.433651.7483
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975acanthochromis_polyacanthusENSAPOP0000000196883.568173.2394
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.37575.7212acanthochromis_polyacanthusENSAPOP0000002200271.196863.8945
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.134675.7212danio_rerioENSDARP0000013528183.932975.5396
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653874.2788betta_splendensENSBSLP0000003578542.9138.1011
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817375betta_splendensENSBSLP0000005586284.397273.7589
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692373.7981gasterosteus_aculeatusENSGACP0000000402374.458966.4502
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692372.1154gasterosteus_aculeatusENSGACP0000002232582.891672.2892
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.692371.1538pundamilia_nyerereiENSPNYP0000000471083.091871.4976
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576976.9231pundamilia_nyerereiENSPNYP0000000984284.360275.8294
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.615475pygocentrus_nattereriENSPNAP0000003536772.727364.4628
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078288.221276.4423pygocentrus_nattereriENSPNAP0000003040487.173475.5344
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.057775.7212myripristis_murdjanENSMMDP0000502847885.238175
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078277.884668.5096myripristis_murdjanENSMMDP0000504259577.697868.3453
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078277.884665.8654cynoglossus_semilaevisENSCSEP0000000299883.076970.2564
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817376.4423cynoglossus_semilaevisENSCSEP000000244068474.8235
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.413573.5577hucho_huchoENSHHUP0000007811875.434866.5217
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.2788hucho_huchoENSHHUP0000008415883.492873.9234
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653873.7981hucho_huchoENSHHUP0000004498375.488166.5944
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.173173.3173oncorhynchus_kisutchENSOKIP0000503902375.054266.1605
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894273.3173oncorhynchus_kisutchENSOKIP0000500198382.897972.4466
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.2788oncorhynchus_kisutchENSOKIP0000508571883.69374.1007
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817377.1635amphiprion_ocellarisENSAOCP0000000190083.411275
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078286.057774.7596amphiprion_ocellarisENSAOCP0000002820784.235373.1765
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078288.942375.9615scleropages_formosusENSSFOP0001501237980.260368.5466
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078279.567371.1538scleropages_formosusENSSFOP0001504684574.38266.5169
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653873.0769mastacembelus_armatusENSMAMP0000003299382.269571.8676
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.336575.4808mastacembelus_armatusENSMAMP0000000658668.400860.501
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.653870.6731oryzias_javanicusENSOJAP0000002354370.445359.5142
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078281.730873.5577sinocyclocheilus_grahamiENSSGRP0000000948170.247963.2231
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.932774.7596sinocyclocheilus_grahamiENSSGRP0000008194371.725664.657
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817374.2788sinocyclocheilus_grahamiENSSGRP0000006009884.798173.3967
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078284.134672.1154anabas_testudineusENSATEP0000000943182.547270.7547
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.817376.4423anabas_testudineusENSATEP0000003116082.830673.7819
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078246.634638.7019stegastes_partitusENSSPAP0000001795471.851959.6296
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078287.575.7212stegastes_partitusENSSPAP0000001446285.046773.5981
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894272.1154cyprinus_carpio_carpioENSCCRP0000000189930.347826.087
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078282.211574.2788cyprinus_carpio_carpioENSCCRP0000015754481.622973.747
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078283.894274.7596cyprinus_carpio_carpioENSCCRP0000015126782.897973.8717
ENSLACG00000018255latimeria_chalumnaeENSLACP0000002078285.576975.7212denticeps_clupeoidesENSDCDP0000002525784.560674.8219

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression