| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSLACG00000016980 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2721 bases |
Strand |
Plus strand |
| Position |
JH126797.1 : 1841644 - 1844364 |
RNA binding domain |
RNase_H |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSLACP00000019305 |
RNase_H |
PF00075 |
3.9e-16 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSLACT00000019439 |
2523 |
841aa |
ENSLACP00000019305 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000013794 | 64.658 | 51.7915 | latimeria_chalumnae | ENSLACP00000019305 | 47.2057 | 37.8121 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000010231 | 53.2012 | 40.7012 | latimeria_chalumnae | ENSLACP00000019305 | 41.4982 | 31.7479 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000005634 | 58.4496 | 45.1163 | latimeria_chalumnae | ENSLACP00000019305 | 44.8276 | 34.6017 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000016456 | 59.9078 | 46.5438 | latimeria_chalumnae | ENSLACP00000019305 | 30.9156 | 24.019 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000001097 | 64.0909 | 48.6364 | latimeria_chalumnae | ENSLACP00000019305 | 16.7658 | 12.7229 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000005323 | 58.5075 | 44.4776 | latimeria_chalumnae | ENSLACP00000019305 | 23.3056 | 17.717 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002979 | 49.5012 | 34.6633 | latimeria_chalumnae | ENSLACP00000019305 | 47.2057 | 33.0559 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002808 | 50.1799 | 35.4317 | latimeria_chalumnae | ENSLACP00000019305 | 33.1748 | 23.4245 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000012795 | 49.3653 | 33.5684 | latimeria_chalumnae | ENSLACP00000019305 | 41.6171 | 28.2996 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000000035 | 54.1667 | 35.8333 | latimeria_chalumnae | ENSLACP00000019305 | 23.1867 | 15.3389 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000004884 | 39.3574 | 27.7108 | latimeria_chalumnae | ENSLACP00000019305 | 34.9584 | 24.6136 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000009485 | 46.7305 | 33.1738 | latimeria_chalumnae | ENSLACP00000019305 | 34.8395 | 24.7325 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000000795 | 58.6854 | 44.1315 | latimeria_chalumnae | ENSLACP00000019305 | 14.8633 | 11.1772 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000020919 | 48.6919 | 33.7209 | latimeria_chalumnae | ENSLACP00000019305 | 39.8335 | 27.5862 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000017661 | 48 | 31.1111 | latimeria_chalumnae | ENSLACP00000019305 | 38.5256 | 24.9703 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000001321 | 26.3231 | 14.7632 | latimeria_chalumnae | ENSLACP00000019305 | 22.4732 | 12.604 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000005457 | 25.9633 | 15.1376 | latimeria_chalumnae | ENSLACP00000019305 | 33.6504 | 19.6195 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000011620 | 42.7966 | 23.7288 | latimeria_chalumnae | ENSLACP00000019305 | 12.0095 | 6.65874 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000011782 | 41.6667 | 21.6667 | latimeria_chalumnae | ENSLACP00000019305 | 11.8906 | 6.18312 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002429 | 26.4943 | 15.9935 | latimeria_chalumnae | ENSLACP00000019305 | 19.5006 | 11.7717 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000004071 | 25.3286 | 14.5759 | latimeria_chalumnae | ENSLACP00000019305 | 25.2081 | 14.5065 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002702 | 22.7848 | 12.6582 | latimeria_chalumnae | ENSLACP00000019305 | 27.824 | 15.4578 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000009473 | 21.3716 | 13.0781 | latimeria_chalumnae | ENSLACP00000019305 | 15.9334 | 9.7503 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000007945 | 41.954 | 22.4138 | latimeria_chalumnae | ENSLACP00000019305 | 8.68014 | 4.63734 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002051 | 25.2157 | 14.6692 | latimeria_chalumnae | ENSLACP00000019305 | 31.2723 | 18.1926 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000012244 | 28.4698 | 16.9039 | latimeria_chalumnae | ENSLACP00000019305 | 19.025 | 11.2961 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019900 | 32.6778 | 18.6082 | latimeria_chalumnae | ENSLACP00000019305 | 25.6837 | 14.6254 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000004387 | 43.686 | 27.6451 | latimeria_chalumnae | ENSLACP00000019305 | 15.22 | 9.63139 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002116 | 41.994 | 25.3776 | latimeria_chalumnae | ENSLACP00000019305 | 16.5279 | 9.98811 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019495 | 18.9542 | 10.2941 | latimeria_chalumnae | ENSLACP00000019305 | 13.7931 | 7.49108 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000010406 | 27.5986 | 15.0538 | latimeria_chalumnae | ENSLACP00000019305 | 27.4673 | 14.9822 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000002519 | 43.5115 | 24.8092 | latimeria_chalumnae | ENSLACP00000019305 | 13.5553 | 7.72889 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000005414 | 26.9347 | 14.7739 | latimeria_chalumnae | ENSLACP00000019305 | 31.8668 | 17.4792 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000008866 | 34.8074 | 22.3966 | latimeria_chalumnae | ENSLACP00000019305 | 29.0131 | 18.6683 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000005547 | 41.3223 | 25.6198 | latimeria_chalumnae | ENSLACP00000019305 | 11.8906 | 7.37218 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000007231 | 38.8406 | 25.5072 | latimeria_chalumnae | ENSLACP00000019305 | 31.8668 | 20.9275 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000016571 | 37.6344 | 22.043 | latimeria_chalumnae | ENSLACP00000019305 | 8.32342 | 4.87515 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000006931 | 33.2908 | 20.2806 | latimeria_chalumnae | ENSLACP00000019305 | 31.0345 | 18.9061 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000000275 | 37.605 | 22.2689 | latimeria_chalumnae | ENSLACP00000019305 | 21.2842 | 12.604 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000004485 | 34.9882 | 22.3404 | latimeria_chalumnae | ENSLACP00000019305 | 35.1962 | 22.4732 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000014145 | 42.3237 | 27.3859 | latimeria_chalumnae | ENSLACP00000019305 | 12.1284 | 7.8478 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000010820 | 33.0243 | 20.0464 | latimeria_chalumnae | ENSLACP00000019305 | 33.8882 | 20.5707 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000010610 | 36.526 | 21.4286 | latimeria_chalumnae | ENSLACP00000019305 | 26.7539 | 15.6956 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000009581 | 36.2772 | 20.2446 | latimeria_chalumnae | ENSLACP00000019305 | 31.7479 | 17.717 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000013755 | 37.7289 | 22.3443 | latimeria_chalumnae | ENSLACP00000019305 | 24.4946 | 14.5065 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000016993 | 33.2344 | 21.5134 | latimeria_chalumnae | ENSLACP00000019305 | 26.635 | 17.2414 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000017258 | 28.5458 | 17.4147 | latimeria_chalumnae | ENSLACP00000019305 | 18.9061 | 11.5339 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000006276 | 19.484 | 11.6548 | latimeria_chalumnae | ENSLACP00000019305 | 26.0404 | 15.5767 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000018671 | 34.1844 | 20.5674 | latimeria_chalumnae | ENSLACP00000019305 | 28.6564 | 17.2414 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000006436 | 19.7347 | 11.7745 | latimeria_chalumnae | ENSLACP00000019305 | 28.2996 | 16.8847 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000008499 | 36.0447 | 21.6906 | latimeria_chalumnae | ENSLACP00000019305 | 26.8728 | 16.1712 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000011415 | 32.767 | 18.0825 | latimeria_chalumnae | ENSLACP00000019305 | 32.1046 | 17.717 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 32.2235 | 17.717 | ciona_intestinalis | ENSCINP00000032038 | 33.3744 | 18.3498 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 32.5803 | 18.1926 | ciona_intestinalis | ENSCINP00000031157 | 26.2956 | 14.6833 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 30.7967 | 17.5981 | ciona_intestinalis | ENSCINP00000033452 | 30.257 | 17.2897 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 60.0476 | 42.5684 | xenopus_tropicalis | ENSXETP00000117152 | 42.652 | 30.2365 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 32.8181 | 19.025 | tetraodon_nigroviridis | ENSTNIP00000009609 | 19.8276 | 11.4943 |
| ENSLACG00000016980 | latimeria_chalumnae | ENSLACP00000019305 | 15.8145 | 8.20452 | ciona_savignyi | ENSCSAVP00000002754 | 38.5507 | 20 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
