| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSLACG00000011272 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2670 bases |
Strand |
Plus strand |
| Position |
JH127828.1 : 586602 - 589271 |
RNA binding domain |
RNase_H , RVT_1 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSLACP00000012795 |
RNase_H |
PF00075 |
3.2e-11 |
1 |
| ENSLACP00000012795 |
RVT_1 |
PF00078 |
5.1e-28 |
2 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSLACT00000012889 |
2127 |
709aa |
ENSLACP00000012795 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002808 | 89.5683 | 83.2734 | latimeria_chalumnae | ENSLACP00000012795 | 70.2398 | 65.3032 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000000035 | 50.5556 | 43.8889 | latimeria_chalumnae | ENSLACP00000012795 | 25.67 | 22.2849 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002979 | 59.4763 | 49.0025 | latimeria_chalumnae | ENSLACP00000012795 | 67.2779 | 55.4302 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000005323 | 74.0299 | 61.4925 | latimeria_chalumnae | ENSLACP00000012795 | 34.9788 | 29.055 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000010231 | 41.6159 | 28.9634 | latimeria_chalumnae | ENSLACP00000012795 | 38.5049 | 26.7983 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000005634 | 46.3566 | 33.4884 | latimeria_chalumnae | ENSLACP00000012795 | 42.1721 | 30.4654 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000016456 | 36.4055 | 23.5023 | latimeria_chalumnae | ENSLACP00000012795 | 22.2849 | 14.3865 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000019305 | 41.6171 | 28.2996 | latimeria_chalumnae | ENSLACP00000012795 | 49.3653 | 33.5684 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000013794 | 37.785 | 25.57 | latimeria_chalumnae | ENSLACP00000012795 | 32.7221 | 22.1439 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000001097 | 64.0909 | 46.8182 | latimeria_chalumnae | ENSLACP00000012795 | 19.8872 | 14.5275 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000004884 | 40.4284 | 27.7108 | latimeria_chalumnae | ENSLACP00000012795 | 42.5952 | 29.1961 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000009485 | 46.252 | 31.4195 | latimeria_chalumnae | ENSLACP00000012795 | 40.9027 | 27.7856 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000000795 | 51.1737 | 36.6197 | latimeria_chalumnae | ENSLACP00000012795 | 15.3738 | 11.0014 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000020919 | 48.4012 | 33.5756 | latimeria_chalumnae | ENSLACP00000012795 | 46.9676 | 32.5811 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000017661 | 45.6296 | 29.6296 | latimeria_chalumnae | ENSLACP00000012795 | 43.4415 | 28.2087 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000001321 | 21.8663 | 12.5348 | latimeria_chalumnae | ENSLACP00000012795 | 22.1439 | 12.6939 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000005457 | 21.4679 | 12.1101 | latimeria_chalumnae | ENSLACP00000012795 | 33.0042 | 18.6178 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000011620 | 43.6441 | 23.7288 | latimeria_chalumnae | ENSLACP00000012795 | 14.5275 | 7.89845 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000011782 | 49.1667 | 26.6667 | latimeria_chalumnae | ENSLACP00000012795 | 16.6432 | 9.0268 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002429 | 22.9402 | 12.7625 | latimeria_chalumnae | ENSLACP00000012795 | 20.0282 | 11.1425 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000004071 | 22.5806 | 12.5448 | latimeria_chalumnae | ENSLACP00000012795 | 26.6573 | 14.8096 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002702 | 20.5453 | 11.295 | latimeria_chalumnae | ENSLACP00000012795 | 29.7602 | 16.3611 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000009473 | 18.0223 | 8.93142 | latimeria_chalumnae | ENSLACP00000012795 | 15.9379 | 7.89845 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000007945 | 40.8046 | 24.1379 | latimeria_chalumnae | ENSLACP00000012795 | 10.0141 | 5.92384 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002051 | 23.0105 | 12.9434 | latimeria_chalumnae | ENSLACP00000012795 | 33.8505 | 19.0409 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012244 | 24.0214 | 14.2349 | latimeria_chalumnae | ENSLACP00000012795 | 19.0409 | 11.2835 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000019900 | 28.8956 | 15.5825 | latimeria_chalumnae | ENSLACP00000012795 | 26.9394 | 14.5275 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000004387 | 37.2014 | 21.1604 | latimeria_chalumnae | ENSLACP00000012795 | 15.3738 | 8.74471 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002116 | 34.7432 | 19.0332 | latimeria_chalumnae | ENSLACP00000012795 | 16.22 | 8.88575 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000019495 | 17.9739 | 10.4575 | latimeria_chalumnae | ENSLACP00000012795 | 15.5148 | 9.0268 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000010406 | 22.3417 | 12.3059 | latimeria_chalumnae | ENSLACP00000012795 | 26.3752 | 14.5275 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000002519 | 35.8779 | 18.3206 | latimeria_chalumnae | ENSLACP00000012795 | 13.2581 | 6.7701 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000005414 | 23.6181 | 12.6633 | latimeria_chalumnae | ENSLACP00000012795 | 33.1453 | 17.7715 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000008866 | 32.525 | 21.5407 | latimeria_chalumnae | ENSLACP00000012795 | 32.158 | 21.2976 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000005547 | 32.2314 | 18.1818 | latimeria_chalumnae | ENSLACP00000012795 | 11.0014 | 6.20592 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000007231 | 35.3623 | 22.3188 | latimeria_chalumnae | ENSLACP00000012795 | 34.4147 | 21.7207 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000016571 | 41.9355 | 22.043 | latimeria_chalumnae | ENSLACP00000012795 | 11.0014 | 5.78279 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000006931 | 33.0357 | 19.3878 | latimeria_chalumnae | ENSLACP00000012795 | 36.5303 | 21.4386 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000000275 | 36.1345 | 19.7479 | latimeria_chalumnae | ENSLACP00000012795 | 24.2595 | 13.2581 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000004485 | 32.8605 | 21.6312 | latimeria_chalumnae | ENSLACP00000012795 | 39.2102 | 25.811 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000014145 | 32.7801 | 19.0871 | latimeria_chalumnae | ENSLACP00000012795 | 11.1425 | 6.48801 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000010820 | 33.1402 | 20.7416 | latimeria_chalumnae | ENSLACP00000012795 | 40.3385 | 25.2468 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000010610 | 37.5 | 22.2403 | latimeria_chalumnae | ENSLACP00000012795 | 32.5811 | 19.323 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000009581 | 34.6467 | 19.837 | latimeria_chalumnae | ENSLACP00000012795 | 35.9661 | 20.5924 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000013755 | 36.8132 | 22.1612 | latimeria_chalumnae | ENSLACP00000012795 | 28.3498 | 17.0663 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000016993 | 30.1187 | 16.9139 | latimeria_chalumnae | ENSLACP00000012795 | 28.6319 | 16.079 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000017258 | 26.93 | 14.5422 | latimeria_chalumnae | ENSLACP00000012795 | 21.1566 | 11.4245 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000006276 | 18.5053 | 9.96441 | latimeria_chalumnae | ENSLACP00000012795 | 29.3371 | 15.7969 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000018671 | 33.617 | 20.4255 | latimeria_chalumnae | ENSLACP00000012795 | 33.4274 | 20.3103 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000006436 | 20.0663 | 12.4378 | latimeria_chalumnae | ENSLACP00000012795 | 34.1326 | 21.1566 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000008499 | 37.3206 | 22.3285 | latimeria_chalumnae | ENSLACP00000012795 | 33.0042 | 19.7461 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000011415 | 32.1602 | 18.568 | latimeria_chalumnae | ENSLACP00000012795 | 37.3766 | 21.5797 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 34.2736 | 20.0282 | ciona_intestinalis | ENSCINP00000032038 | 29.9261 | 17.4877 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 34.9788 | 20.3103 | ciona_intestinalis | ENSCINP00000031157 | 23.8004 | 13.8196 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 33.1453 | 20.0282 | ciona_intestinalis | ENSCINP00000033452 | 27.4533 | 16.5888 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 55.5712 | 39.4922 | xenopus_tropicalis | ENSXETP00000117152 | 33.277 | 23.6486 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 37.7997 | 21.8618 | tetraodon_nigroviridis | ENSTNIP00000009609 | 19.2529 | 11.1351 |
| ENSLACG00000011272 | latimeria_chalumnae | ENSLACP00000012795 | 14.5275 | 8.03949 | ciona_savignyi | ENSCSAVP00000002754 | 29.8551 | 16.5217 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
