RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSKMAG00000007151	Gene ID	108237845	Accession	-
Symbol	mrpl53	Alias	-	Full Name	mitochondrial ribosomal protein L53
Status	Confidence	Length	3142 bases	Strand	Plus strand
Position	LWHD01000003.1 : 6114500 - 6117641	RNA binding domain	MRP_L53
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSKMAP00000009515	MRP_L53	PF10780	6.7e-19	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
mrpl53-201	ENSKMAT00000009661	604	148aa	ENSKMAP00000009515

Gene Model

Click here to download ENSKMAG00000007151's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSKMAG00000007151's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSKMAG00000007151

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	60.1351	fundulus_heteroclitus	ENSFHEP00000028665	87.037	82.4074
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	57.4324	xiphophorus_maculatus	ENSXMAP00000029461	85.1852	78.7037
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.8378	56.0811	cyclopterus_lumpus	ENSCLMP00005005643	85.3211	76.1468
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	56.0811	poecilia_reticulata	ENSPREP00000011924	88.4615	79.8077
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	haplochromis_burtoni	ENSHBUP00000022327	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	51.3514	43.2432	oreochromis_niloticus	ENSONIP00000060766	58.0153	48.855
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	56.7568	sparus_aurata	ENSSAUP00010007800	87.037	77.7778
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	astatotilapia_calliptera	ENSACLP00000022885	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	56.0811	oryzias_latipes	ENSORLP00000043168	85.1852	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	53.3784	lates_calcarifer	ENSLCAP00010029991	84.2593	73.1481
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	47.2973	39.8649	dicentrarchus_labrax	ENSDLAP00005045359	58.8235	49.5798
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	58.1081	oryzias_melastigma	ENSOMEP00000011529	87.037	79.6296
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	53.3784	takifugu_rubripes	ENSTRUP00000037432	86.7924	74.5283
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	57.4324	amphiprion_percula	ENSAPEP00000015926	85.1852	78.7037
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	57.4324	hippocampus_comes	ENSHCOP00000015622	87.8505	79.4393
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.8378	57.4324	oryzias_javanicus	ENSOJAP00000011780	86.1111	78.7037
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	neolamprologus_brichardi	ENSNBRP00000017056	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	54.0541	scophthalmus_maximus	ENSSMAP00000048160	85.1852	74.0741
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	55.4054	betta_splendens	ENSBSLP00000034802	84.2593	75.9259
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	64.1892	57.4324	cyprinodon_variegatus	ENSCVAP00000021080	87.963	78.7037
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	57.4324	mastacembelus_armatus	ENSMAMP00000041929	85.9813	79.4393
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	labrus_bergylta	ENSLBEP00000023765	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	55.4054	poecilia_latipinna	ENSPLAP00000022261	88.4615	78.8462
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.8378	57.4324	oryzias_sinensis	ENSOSIP00000000041	82.3009	75.2212
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	maylandia_zebra	ENSMZEP00005038026	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	maylandia_zebra	ENSMZEP00005004715	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	54.7297	amphilophus_citrinellus	ENSACIP00000020161	83.3333	75
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	56.0811	sander_lucioperca	ENSSLUP00000004862	87.037	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	56.0811	pundamilia_nyererei	ENSPNYP00000015656	84.2593	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	63.5135	58.1081	acanthochromis_polyacanthus	ENSAPOP00000031455	87.037	79.6296
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	55.4054	poecilia_formosa	ENSPFOP00000014385	88.4615	78.8462
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.8378	55.4054	poecilia_formosa	ENSPFOP00000014390	86.1111	75.9259
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	54.0541	seriola_lalandi_dorsalis	ENSSLDP00000017020	81.4815	74.0741
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	65.5405	57.4324	cynoglossus_semilaevis	ENSCSEP00000027578	82.2034	72.0339
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	56.7568	45.9459	cottoperca_gobio	ENSCGOP00000010236	77.7778	62.963
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	65.5405	57.4324	stegastes_partitus	ENSSPAP00000026337	82.906	72.6496
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	56.0811	seriola_dumerili	ENSSDUP00000015545	83.3333	76.8519
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	51.3514	gasterosteus_aculeatus	ENSGACP00000004518	83.3333	70.3704
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	57.4324	amphiprion_ocellaris	ENSAOCP00000011452	85.1852	78.7037
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	53.3784	anabas_testudineus	ENSATEP00000019547	85.1852	73.1481
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	66.2162	60.8108	nothobranchius_furzeri	ENSNFUP00015031307	90.7407	83.3333
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	43.2432	34.4595	eptatretus_burgeri	ENSEBUP00000015553	45.7143	36.4286
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	48.6486	37.1622	callorhinchus_milii	ENSCMIP00000002458	42.8571	32.7381
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	57.4324	50.6757	latimeria_chalumnae	ENSLACP00000009951	77.9817	68.8073
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	58.1081	49.3243	lepisosteus_oculatus	ENSLOCP00000003371	79.6296	67.5926
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.1351	52.027	clupea_harengus	ENSCHAP00000015667	76.0684	65.812
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	58.7838	45.9459	danio_rerio	ENSDARP00000025933	80.5556	62.963
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.1351	46.6216	carassius_auratus	ENSCARP00000097762	83.1776	64.486
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	53.3784	39.1892	carassius_auratus	ENSCARP00000092977	80.6122	59.1837
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	47.973	astyanax_mexicanus	ENSAMXP00000052150	82.243	66.3551
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	51.3514	ictalurus_punctatus	ENSIPUP00000001892	85.0467	71.028
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	50	esox_lucius	ENSELUP00000002452	81.4815	68.5185
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	58.1081	45.9459	electrophorus_electricus	ENSEEEP00000031528	83.4951	66.0194
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	54.0541	oncorhynchus_kisutch	ENSOKIP00005023503	83.3333	74.0741
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	52.027	43.2432	oncorhynchus_kisutch	ENSOKIP00005011293	66.3793	55.1724
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	61.4865	54.0541	oncorhynchus_mykiss	ENSOMYP00000129205	84.2593	74.0741
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.1351	53.3784	salmo_salar	ENSSSAP00000165510	30.4795	27.0548
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	54.0541	salmo_salar	ENSSSAP00000146590	52.3256	46.5116
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	43.2432	34.4595	salmo_trutta	ENSSTUP00000096838	85.3333	68
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	53.3784	salmo_trutta	ENSSTUP00000102775	83.3333	73.1481
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.1351	53.3784	gadus_morhua	ENSGMOP00000003198	83.9623	74.5283
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	52.7027	38.5135	xenopus_tropicalis	ENSXETP00000106971	71.5596	52.2936
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	52.7027	41.8919	chrysemys_picta_bellii	ENSCPBP00000009409	70.9091	56.3636
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	52.7027	39.1892	sphenodon_punctatus	ENSSPUP00000011764	69.0266	51.3274
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	48.6486	39.8649	laticauda_laticaudata	ENSLLTP00000000225	67.9245	55.6604
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	49.3243	39.8649	notechis_scutatus	ENSNSUP00000020512	68.8679	55.6604
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	47.973	39.1892	pseudonaja_textilis	ENSPTXP00000008643	66.9811	54.717
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	40.5405	29.0541	anas_platyrhynchos_platyrhynchos	ENSAPLP00000021858	57.1429	40.9524
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	36.4865	gallus_gallus	ENSGALP00010004030	69.4444	50
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	51.3514	39.1892	serinus_canaria	ENSSCAP00000002890	69.7248	53.211
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50	36.4865	meleagris_gallopavo	ENSMGAP00000030656	68.5185	50
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	37.1622	parus_major	ENSPMJP00000006549	68.8073	50.4587
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	56.0811	46.6216	erpetoichthys_calabaricus	ENSECRP00000022091	77.5701	64.486
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	40.5405	29.0541	pelodiscus_sinensis	ENSPSIP00000015608	61.8557	44.3299
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	47.973	39.1892	naja_naja	ENSNNAP00000017360	66.9811	54.717
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	37.8378	strigops_habroptila	ENSSHBP00005007709	68.8073	51.3761
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	40.5405	29.0541	podarcis_muralis	ENSPMRP00000010760	56.0748	40.1869
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	45.2703	32.4324	taeniopygia_guttata	ENSTGUP00000012013	47.5177	34.0426
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	38.5135	ficedula_albicollis	ENSFALP00000031175	69.4444	52.7778
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	42.5676	29.0541	anser_brachyrhynchus	ENSABRP00000009353	56.7568	38.7387
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	45.2703	salvator_merianae	ENSSMRP00000014043	49.7175	37.8531
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.1351	52.7027	hucho_hucho	ENSHHUP00000043845	82.4074	72.2222
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	54.0541	45.2703	hucho_hucho	ENSHHUP00000062789	84.2105	70.5263
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	56.7568	46.6216	denticeps_clupeoides	ENSDCDP00000052013	78.5047	64.486
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	53.3784	41.8919	gopherus_evgoodei	ENSGEVP00005000093	71.8182	56.3636
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	51.3514	39.1892	aquila_chrysaetos_chrysaetos	ENSACCP00020006713	69.7248	53.211
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	58.1081	47.2973	sinocyclocheilus_grahami	ENSSGRP00000050474	79.6296	64.8148
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	46.6216	sinocyclocheilus_grahami	ENSSGRP00000031743	82.243	64.486
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	41.2162	29.7297	leptobrachium_leishanense	ENSLLEP00000007141	57.5472	41.5094
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	40.5405	leptobrachium_leishanense	ENSLLEP00000042860	59.2105	39.4737
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	52.7027	41.8919	terrapene_carolina_triunguis	ENSTMTP00000008425	70.9091	56.3636
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	51.3514	33.1081	cyprinus_carpio_carpio	ENSCCRP00000012214	57.5758	37.1212
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	34.4595	cyprinus_carpio_carpio	ENSCCRP00000152510	70.0935	47.6636
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	50.6757	35.8108	coturnix_japonica	ENSCJPP00005014128	69.4444	49.0741
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	60.8108	53.3784	oncorhynchus_tshawytscha	ENSOTSP00005044939	83.3333	73.1481
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	53.3784	43.9189	oncorhynchus_tshawytscha	ENSOTSP00005006629	83.1579	68.4211
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	62.1622	53.3784	myripristis_murdjan	ENSMMDP00005012801	85.1852	73.1481
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	40.5405	31.7568	chelonoidis_abingdonii	ENSCABP00000020939	59.4059	46.5347
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	54.7297	43.9189	scleropages_formosus	ENSSFOP00015006909	76.4151	61.3208
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	59.4595	49.3243	pygocentrus_nattereri	ENSPNAP00000025396	68.2171	56.5891
ENSKMAG00000007151	kryptolebias_marmoratus	ENSKMAP00000009515	54.0541	45.2703	paramormyrops_kingsleyae	ENSPKIP00000023298	75.4717	63.2075

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression