RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSKMAG00000003526	Gene ID	108249127	Accession	-
Symbol		Alias	-	Full Name	serine/arginine repetitive matrix protein 2
Status	Confidence	Length	12508 bases	Strand	Minus strand
Position	LWHD01000409.1 : 120446 - 132953	RNA binding domain	cwf21
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSKMAP00000004612	cwf21	PF08312	1.1e-12	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSKMAT00000004697	6982	2076aa	ENSKMAP00000004612

Gene Model

Click here to download ENSKMAG00000003526's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSKMAG00000003526's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSKMAG00000003526

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSKMAG00000003526	kryptolebias_marmoratus	ENSKMAP00000004612	43.3044	36.5607	oryzias_sinensis	ENSOSIP00000030182	72.6758	61.3581

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression