RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSKMAG00000000086 | Gene ID |
108231896 |
Accession |
- |
Symbol |
si |
Alias |
- |
Full Name |
uncharacterized LOC108231896 |
Status |
Confidence |
Length |
3516 bases |
Strand |
Minus strand |
Position |
LWHD01000001.1 : 1172483 - 1175998 |
RNA binding domain |
zf-CCCH |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSKMAP00000000096 |
zf-CCCH |
PF00642 |
1.2e-05 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSKMAT00000000120 |
3436 |
244aa |
ENSKMAP00000000096 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSKMAG00000000086 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 72.1311 | 62.7049 | fundulus_heteroclitus | ENSFHEP00000006799 | 75.2137 | 65.3846 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 76.6393 | 68.8525 | xiphophorus_maculatus | ENSXMAP00000035425 | 77.5934 | 69.7095 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 77.0492 | 69.6721 | poecilia_reticulata | ENSPREP00000012550 | 80 | 72.3404 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 73.7705 | 63.9344 | haplochromis_burtoni | ENSHBUP00000022987 | 75 | 65 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 73.7705 | 64.3443 | astatotilapia_calliptera | ENSACLP00000025007 | 75 | 65.4167 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 68.4426 | 54.918 | oryzias_latipes | ENSORLP00000036160 | 67.8862 | 54.4715 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 68.4426 | 55.3279 | oryzias_melastigma | ENSOMEP00000009426 | 68.4426 | 55.3279 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 76.2295 | 66.3934 | amphiprion_percula | ENSAPEP00000025671 | 72.093 | 62.7907 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 65.5738 | 51.6393 | hippocampus_comes | ENSHCOP00000017899 | 66.39 | 52.2822 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 73.3607 | 64.3443 | neolamprologus_brichardi | ENSNBRP00000019537 | 74.5833 | 65.4167 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 74.1803 | 64.7541 | cyprinodon_variegatus | ENSCVAP00000031122 | 74.1803 | 64.7541 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 75.4098 | 61.0656 | labrus_bergylta | ENSLBEP00000010792 | 68.9139 | 55.8052 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 77.8689 | 70.082 | poecilia_latipinna | ENSPLAP00000001114 | 78.8382 | 70.9544 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 73.3607 | 64.7541 | maylandia_zebra | ENSMZEP00005031709 | 77.4892 | 68.3983 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 61.4754 | 51.2295 | amphilophus_citrinellus | ENSACIP00000014882 | 76.9231 | 64.1026 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 74.1803 | 64.3443 | pundamilia_nyererei | ENSPNYP00000030321 | 75.4167 | 65.4167 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 76.2295 | 66.8033 | acanthochromis_polyacanthus | ENSAPOP00000008810 | 71.5385 | 62.6923 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 75 | 67.6229 | poecilia_formosa | ENSPFOP00000007865 | 78.2051 | 70.5128 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 77.8689 | 67.2131 | seriola_lalandi_dorsalis | ENSSLDP00000004139 | 75.3968 | 65.0794 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 67.2131 | 55.3279 | cynoglossus_semilaevis | ENSCSEP00000007012 | 64.5669 | 53.1496 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 75 | 67.6229 | stegastes_partitus | ENSSPAP00000001775 | 71.2062 | 64.2023 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 77.8689 | 67.2131 | seriola_dumerili | ENSSDUP00000000060 | 75.3968 | 65.0794 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 29.5082 | 15.5738 | caenorhabditis_elegans | W05B10.2.3 | 36 | 19 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 77.0492 | 66.3934 | amphiprion_ocellaris | ENSAOCP00000017112 | 72.8682 | 62.7907 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 36.0656 | 21.7213 | ciona_intestinalis | ENSCINP00000001340 | 52.6946 | 31.7365 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 31.5574 | 19.6721 | drosophila_melanogaster | FBpp0289271 | 42.7778 | 26.6667 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 40.9836 | 28.2787 | latimeria_chalumnae | ENSLACP00000004840 | 52.6316 | 36.3158 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 57.377 | 44.2623 | danio_rerio | ENSDARP00000098389 | 60.6061 | 46.7532 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 62.7049 | 50 | astyanax_mexicanus | ENSAMXP00000036865 | 58.8462 | 46.9231 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 58.1967 | 45.9016 | ictalurus_punctatus | ENSIPUP00000003166 | 58.6777 | 46.281 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 57.377 | 45.082 | cyprinus_carpio_carpio | ENSCCRP00000168558 | 60.0858 | 47.2103 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 55.3279 | 36.8852 | pygocentrus_nattereri | ENSPNAP00000008175 | 55.5556 | 37.037 |
ENSKMAG00000000086 | kryptolebias_marmoratus | ENSKMAP00000000096 | 55.7377 | 39.7541 | paramormyrops_kingsleyae | ENSPKIP00000007831 | 56.6667 | 40.4167 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |