RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSJJAG00000021883	Gene ID	101615290	Accession	-
Symbol	Tars2	Alias	-	Full Name	threonyl-tRNA synthetase 2, mitochondrial
Status	Confidence	Length	21739 bases	Strand	Plus strand
Position	JH725537.1 : 321497 - 343235	RNA binding domain	HGTP_anticodon , tRNA_SAD , tRNA-synt_2b
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSJJAP00000021611	HGTP_anticodon	PF03129	3e-18	1
ENSJJAP00000021611	tRNA_SAD	PF07973	2.2e-09	2
ENSJJAP00000021611	tRNA-synt_2b	PF00587	6.8e-31	3
ENSJJAP00000021608	HGTP_anticodon	PF03129	3.3e-18	1
ENSJJAP00000021608	tRNA_SAD	PF07973	1.9e-09	2
ENSJJAP00000021608	tRNA-synt_2b	PF00587	4.7e-29	3
ENSJJAP00000021605	HGTP_anticodon	PF03129	3.5e-18	1
ENSJJAP00000021605	tRNA_SAD	PF07973	2.1e-09	2
ENSJJAP00000021605	tRNA-synt_2b	PF00587	8.1e-31	3
ENSJJAP00000021600	HGTP_anticodon	PF03129	3.5e-18	1
ENSJJAP00000021600	tRNA_SAD	PF07973	2e-09	2
ENSJJAP00000021600	tRNA-synt_2b	PF00587	8.3e-31	3
ENSJJAP00000021615	tRNA_SAD	PF07973	1e-09	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
Tars2-201	ENSJJAT00000028155	2160	719aa	ENSJJAP00000021600
Tars2-202	ENSJJAT00000028160	2136	711aa	ENSJJAP00000021605
Tars2-203	ENSJJAT00000028163	2082	693aa	ENSJJAP00000021608
Tars2-204	ENSJJAT00000028166	1917	638aa	ENSJJAP00000021611
Tars2-205	ENSJJAT00000028170	1278	426aa	ENSJJAP00000021615

Gene Model

Click here to download ENSJJAG00000021883's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSJJAG00000021883's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000008592	68.4647	51.4523	jaculus_jaculus	ENSJJAP00000021600	68.8456	51.7385
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000013205	35.906	21.4765	jaculus_jaculus	ENSJJAP00000021600	14.8818	8.90125
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000024876	38.3562	22.2603	jaculus_jaculus	ENSJJAP00000021600	15.5772	9.04033
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000012437	37.9104	22.0896	jaculus_jaculus	ENSJJAP00000021600	17.6634	10.2921

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	43.1154	34.9096	ornithorhynchus_anatinus	ENSOANP00000048351	38.6052	31.2578
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	80.6676	71.3491	sarcophilus_harrisii	ENSSHAP00000024350	81.3464	71.9495
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	76.6342	68.4284	notamacropus_eugenii	ENSMEUP00000012991	76.6342	68.4284
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	46.3143	42.2809	choloepus_hoffmanni	ENSCHOP00000000707	72.7074	66.3755
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.5688	83.7274	dasypus_novemcinctus	ENSDNOP00000004603	90.0699	84.1958
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	68.0111	62.3088	erinaceus_europaeus	ENSEEUP00000000160	68.0111	62.3088
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	30.7371	28.3727	erinaceus_europaeus	ENSEEUP00000011533	60.218	55.5858
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	81.6412	75.1043	echinops_telfairi	ENSETEP00000006966	81.9832	75.419
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.7079	84.2837	callithrix_jacchus	ENSCJAP00000011960	89.8329	84.4011
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	87.2045	81.9193	cercocebus_atys	ENSCATP00000022463	89.6996	84.2632
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.3171	82.6147	macaca_fascicularis	ENSMFAP00000014628	87.3453	81.7056
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.9861	84.5619	macaca_mulatta	ENSMMUP00000008230	90.1114	84.6797
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	73.1572	66.4812	macaca_nemestrina	ENSMNEP00000038134	79.0977	71.8797
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.9861	84.4228	papio_anubis	ENSPANP00000011899	90.1114	84.5404
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	77.1905	72.6008	gorilla_gorilla	ENSGGOP00000006177	90.2439	84.8781
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	84.4228	mandrillus_leucophaeus	ENSMLEP00000012071	89.9721	84.5404
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	84.5619	pan_paniscus	ENSPPAP00000038656	89.9721	84.6797
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.1252	84.8401	pan_troglodytes	ENSPTRP00000002129	90.2507	84.9582
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	84.9791	pongo_abelii	ENSPPYP00000041602	90.39	85.0975
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.1252	84.8401	homo_sapiens	ENSP00000358060	90.2507	84.9582
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.7344	83.5883	vulpes_vulpes	ENSVVUP00000015643	88.4882	83.3565
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.5953	83.4492	canis_lupus_familiaris	ENSCAFP00845024349	88.7187	83.5655
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	74.4089	70.5146	ursus_americanus	ENSUAMP00000031269	87.2757	82.708
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	84.1446	ailuropoda_melanoleuca	ENSAMEP00000001673	88.9972	84.2618
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.9861	85.5355	mustela_putorius_furo	ENSMPUP00000004756	89.7365	85.2982
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.7344	83.8665	felis_catus	ENSFCAP00000001577	89.4811	84.5722
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	83.8665	panthera_leo	ENSPLOP00000026457	89.6213	84.5722
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	59.8053	56.6064	tursiops_truncatus	ENSTTRP00000010074	73.0051	69.1002
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.7344	83.7274	panthera_pardus	ENSPPRP00000027855	89.4811	84.432
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	82.6147	delphinapterus_leucas	ENSDLEP00000013167	53.7426	49.9579
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.3171	84.2837	physeter_catodon	ENSPCTP00005028565	91.2356	87.069
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	85.8136	balaenoptera_musculus	ENSBMSP00010020294	90.39	85.9332
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	83.3102	loxodonta_africana	ENSLAFP00000004164	88.6269	83.0791
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.7079	84.4228	equus_asinus	ENSEASP00005059355	89.4591	84.1886
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	84.701	equus_caballus	ENSECAP00000012043	89.5978	84.466
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	70.0974	64.8122	procavia_capensis	ENSPCAP00000015582	75.6757	69.97
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	84.5619	sus_scrofa	ENSSSCP00000022087	89.5543	84.6797
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.1252	84.9791	camelus_dromedarius	ENSCDRP00005024755	90.2507	85.0975
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	83.1711	bos_taurus	ENSBTAP00000004948	88.9972	83.2869
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.8734	83.1711	capra_hircus	ENSCHIP00000019635	88.9972	83.2869
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.5688	83.7274	ovis_aries_rambouillet	ENSOARP00020010615	89.6936	83.844
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	77.0515	71.9054	ochotona_princeps	ENSOPRP00000009323	77.1588	72.0056
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	84.701	oryctolagus_cuniculus	ENSOCUP00000046284	89.5543	84.8189
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	83.8665	marmota_marmota_marmota	ENSMMMP00000022113	89.9721	83.9833
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	71.7663	66.064	dipodomys_ordii	ENSDORP00000007099	85.7143	78.9037
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.7079	83.8665	urocitellus_parryii	ENSUPAP00010002672	89.8329	83.9833
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.6815	85.9527	cricetulus_griseus_chok1gshd	ENSCGRP00001026117	90.1798	85.4772
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.0125	84.5619	mesocricetus_auratus	ENSMAUP00000006188	88.5201	84.0941
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.9861	85.8136	mus_caroli	MGP_CAROLIEiJ_P0059214	89.4882	85.3389
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	85.5355	mus_musculus	ENSMUSP00000029752	89.3499	85.0622
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	85.3964	mus_spretus	MGP_SPRETEiJ_P0061590	89.3499	84.9239
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	85.3964	mus_spicilegus	ENSMSIP00000008003	89.3499	84.9239
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.9861	84.9791	rattus_norvegicus	ENSRNOP00000072886	89.4882	84.509
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.5424	85.6745	mus_pahari	MGP_PahariEiJ_P0070182	90.0415	85.2006
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	36.3004	33.1015	cavia_porcellus	ENSCPOP00000009506	90	82.069
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	87.8999	81.5021	octodon_degus	ENSODEP00000016137	87.1724	80.8276
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	80.5285	71.9054	monodelphis_domestica	ENSMODP00000023437	80.7531	72.106
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	84.9791	ursus_maritimus	ENSUMAP00000004595	89.5543	85.0975
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	81.0848	71.9054	vombatus_ursinus	ENSVURP00010000610	81.311	72.106
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	81.0848	71.9054	vombatus_ursinus	ENSVURP00010019924	81.0848	71.9054
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	83.7274	bos_grunniens	ENSBGRP00000001188	88.3242	82.6923
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	87.2045	80.8067	heterocephalus_glaber_female	ENSHGLP00000012895	87.6923	81.2587
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	64.1168	60.0835	vicugna_pacos	ENSVPAP00000005042	67.0058	62.7907
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	84.4228	78.3032	bos_indicus_hybrid	ENSBIXP00005023943	76.2563	70.7286
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	76.6342	70.3755	otolemur_garnettii	ENSOGAP00000004796	80.0872	73.5465
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	85.9527	80.1113	chinchilla_lanigera	ENSCLAP00000025157	87.909	81.9346
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	85.6745	79.694	microcebus_murinus	ENSMICP00000007312	86.8829	80.8181
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.5688	84.1446	aotus_nancymaae	ENSANAP00000003567	89.6936	84.2618
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	67.3157	62.5869	tupaia_belangeri	ENSTBEP00000003458	67.7871	63.0252
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	82.0584	76.7733	saimiri_boliviensis_boliviensis	ENSSBOP00000000346	90.2141	84.4037
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	81.0848	71.9054	phascolarctos_cinereus	ENSPCIP00000010986	81.311	72.106
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.5953	82.8929	ictidomys_tridecemlineatus	ENSSTOP00000007459	89.8448	84.0621
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	85.5355	77.0515	sorex_araneus	ENSSARP00000011874	87.358	78.6932
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.0125	83.032	bison_bison_bison	ENSBBBP00000015860	89.1365	83.1476
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.4033	85.9527	monodon_monoceros	ENSMMNP00015006193	90.5293	86.0724
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.7079	84.5619	catagonus_wagneri	ENSCWAP00000011251	89.8329	84.6797
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.4033	85.9527	phocoena_sinus	ENSPSNP00000002590	90.5293	86.0724
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.2907	83.5883	cervus_hanglu_yarkandensis	ENSCHYP00000017991	89.415	83.7047
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	84.4228	prolemur_simus	ENSPSMP00000030630	90.39	84.5404
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.6815	84.4228	sciurus_vulgaris	ENSSVLP00005001328	90.8078	84.5404
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	18.4979	17.6634	nannospalax_galili	ENSNGAP00000026713	93.662	89.4366
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.4033	85.1182	carlito_syrichta	ENSTSYP00000023531	90.5293	85.2368
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.1252	84.8401	chlorocebus_sabaeus	ENSCSAP00000014094	90.2507	84.9582
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	84.701	rhinopithecus_roxellana	ENSRROP00000013429	90.39	84.8189
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	84.9791	79.2768	rhinolophus_ferrumequinum	ENSRFEP00010031138	83.1292	77.551
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	84.4228	propithecus_coquereli	ENSPCOP00000011471	90.39	84.5404
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.5688	84.9791	peromyscus_maniculatus_bairdii	ENSPEMP00000014384	88.9503	84.3923
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	90.2643	84.9791	nomascus_leucogenys	ENSNLEP00000012029	90.39	85.0975
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.5688	84.1446	cebus_imitator	ENSCCAP00000032597	89.6936	84.2618
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.1516	83.5883	moschus_moschiferus	ENSMMSP00000026661	89.2758	83.7047
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	85.1182	microtus_ochrogaster	ENSMOCP00000020899	88.935	84.6473
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	84.4228	78.1641	pteropus_vampyrus	ENSPVAP00000004108	84.5404	78.273
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	88.5953	83.4492	canis_lupus_dingo	ENSCAFP00020024978	88.7187	83.5655
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	82.6147	76.9124	rhinopithecus_bieti	ENSRBIP00000042513	85.1003	79.2264
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.847	85.2573	neovison_vison	ENSNVIP00000021453	89.9721	85.376
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.4298	83.7274	bos_mutus	ENSBMUP00000031618	89.1817	83.4951
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	89.7079	84.0056	myotis_lucifugus	ENSMLUP00000011941	89.4591	83.7725
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	87.4826	82.4757	panthera_tigris_altaica	ENSPTIP00000006181	88.2188	83.1697
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	62.8651	46.7316	caenorhabditis_elegans	C47D12.6a.1	62.3448	46.3448
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	23.783	12.9346	caenorhabditis_elegans	T20H4.3a.1	29.432	16.0069
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	68.2893	50.7649	drosophila_melanogaster	FBpp0312095	65.7296	48.8621
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	6.39777	2.78164	petromyzon_marinus	ENSPMAP00000000155	21.6981	9.43396
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	21.4186	11.2656	eptatretus_burgeri	ENSEBUP00000026111	29.2776	15.3992
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	8.20584	4.31154	lepisosteus_oculatus	ENSLOCP00000020757	27.4419	14.4186
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	11.822	7.92768	erpetoichthys_calabaricus	ENSECRP00000025700	61.5942	41.3043
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	24.6175	13.2128	poecilia_latipinna	ENSPLAP00000018447	27.4419	14.7287
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	63.9777	47.7051	ciona_savignyi	ENSCSAVP00000006647	64.1562	47.8382
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	62.3088	45.758	saccharomyces_cerevisiae	YIL078W	61.0354	44.8229
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	28.3727	15.5772	saccharomyces_cerevisiae	YHR020W	29.6512	16.2791
ENSJJAG00000021883	jaculus_jaculus	ENSJJAP00000021600	7.7886	3.61613	tetraodon_nigroviridis	ENSTNIP00000004410	24.5614	11.4035

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression