RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSJJAG00000000764	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	7144 bases	Strand	Plus strand
Position	JH725447.1 : 5320971 - 5328114	RNA binding domain	RTC_insert
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSJJAP00000000899	RTC_insert	PF05189	1.7e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSJJAT00000000977	558	185aa	ENSJJAP00000000899

Gene Model

Click here to download ENSJJAG00000000764's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSJJAG00000000764's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000012644	41.7367	38.0952	jaculus_jaculus	ENSJJAP00000000899	80.5405	73.5135
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000022865	44.2359	40.7507	jaculus_jaculus	ENSJJAP00000000899	89.1892	82.1622
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000013408	23.4694	12.9252	jaculus_jaculus	ENSJJAP00000000899	37.2973	20.5405

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	76.2162	61.6216	ornithorhynchus_anatinus	ENSOANP00000044462	36.3402	29.3814
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	87.5676	77.8378	sarcophilus_harrisii	ENSSHAP00000016561	43.4316	38.6059
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	88.1081	78.3784	notamacropus_eugenii	ENSMEUP00000006991	43.6997	38.874
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	68.1081	61.0811	choloepus_hoffmanni	ENSCHOP00000006390	39.2523	35.2025
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	86.4865	77.8378	dasypus_novemcinctus	ENSDNOP00000015443	60.3774	54.3396
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	70.2703	60.5405	echinops_telfairi	ENSETEP00000011437	40	34.4615
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	87.027	77.2973	loxodonta_africana	ENSLAFP00000014671	43.1635	38.3378
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	76.7568	65.9459	procavia_capensis	ENSPCAP00000001341	38.3784	32.973
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	88.1081	77.8378	monodelphis_domestica	ENSMODP00000044432	43.6997	38.6059
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	88.1081	78.3784	vombatus_ursinus	ENSVURP00010008795	75.814	67.4419
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	72.973	phascolarctos_cinereus	ENSPCIP00000000213	42.6184	37.6045
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	54.5946	37.2973	caenorhabditis_elegans	ZK1127.5.1	26.6491	18.2058
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	60	41.6216	drosophila_melanogaster	FBpp0073651	28.9062	20.0521
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	65.9459	44.3243	ciona_intestinalis	ENSCINP00000032808	32.4468	21.8085
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	60.5405	47.027	petromyzon_marinus	ENSPMAP00000005965	59.5745	46.2766
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	63.2432	40.5405	eptatretus_burgeri	ENSEBUP00000027040	31.5364	20.2156
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	callorhinchus_milii	ENSCMIP00000031563	42.033	34.3407
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	74.5946	62.1622	latimeria_chalumnae	ENSLACP00000005173	37.2973	31.0811
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.0811	70.2703	lepisosteus_oculatus	ENSLOCP00000012426	39.7878	34.4828
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	78.9189	64.3243	clupea_harengus	ENSCHAP00000029823	38.1201	31.0705
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	67.027	danio_rerio	ENSDARP00000055877	40.327	33.7875
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	68.6487	carassius_auratus	ENSCARP00000056226	36.2745	31.1275
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	79.4595	67.027	astyanax_mexicanus	ENSAMXP00000028077	39.7297	33.5135
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	55.1351	44.8649	ictalurus_punctatus	ENSIPUP00000026722	27.4194	22.3118
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.0811	69.7297	electrophorus_electricus	ENSEEEP00000039948	40.2145	34.5844
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	76.2162	63.7838	esox_lucius	ENSELUP00000030145	38.1081	31.8919
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80.5405	66.4865	oncorhynchus_kisutch	ENSOKIP00005092368	40.0538	33.0645
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	67.027	oncorhynchus_mykiss	ENSOMYP00000111657	35.4916	29.7362
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	71.8919	59.4595	salmo_salar	ENSSSAP00000171774	33.3333	27.5689
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	79.4595	67.027	salmo_trutta	ENSSTUP00000012058	38.6842	32.6316
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	65.4054	gadus_morhua	ENSGMOP00000048572	40.7507	32.4397
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	67.5676	fundulus_heteroclitus	ENSFHEP00000009964	37.2881	30.2663
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	poecilia_reticulata	ENSPREP00000011818	41.129	33.871
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.6487	xiphophorus_maculatus	ENSXMAP00000023017	41.129	34.1398
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80.5405	66.4865	oryzias_latipes	ENSORLP00000013085	40.0538	33.0645
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	68.6487	cyclopterus_lumpus	ENSCLMP00005039488	40.1055	33.5092
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.1892	oreochromis_niloticus	ENSONIP00000033361	40.6915	34.0426
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	69.1892	astatotilapia_calliptera	ENSACLP00000032057	40.8602	34.4086
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.1892	haplochromis_burtoni	ENSHBUP00000021596	41.129	34.4086
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	sparus_aurata	ENSSAUP00010035401	41.129	33.871
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	70.2703	xenopus_tropicalis	ENSXETP00000094861	41.129	34.9462
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	lates_calcarifer	ENSLCAP00010009492	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	72.4324	chrysemys_picta_bellii	ENSCPBP00000036703	37.9562	32.6034
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	68.1081	crocodylus_porosus	ENSCPRP00005006121	38.342	32.6425
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.8649	74.0541	sphenodon_punctatus	ENSSPUP00000021226	42.0912	36.7292
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	laticauda_laticaudata	ENSLLTP00000023251	40.4762	33.3333
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	3.24324	2.7027	notechis_scutatus	ENSNSUP00000027945	4.22535	3.52113
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	68.6487	notechis_scutatus	ENSNSUP00000027946	71.6279	59.0698
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	69.1892	pseudonaja_textilis	ENSPTXP00000027194	41.2869	34.3164
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	70.2703	anas_platyrhynchos_platyrhynchos	ENSAPLP00000030939	40.2597	33.7662
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	76.7568	62.1622	gallus_gallus	ENSGALP00010015281	33.8902	27.4463
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	70.8108	meleagris_gallopavo	ENSMGAP00000001783	72.5581	60.9302
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	3.78378	2.16216	meleagris_gallopavo	ENSMGAP00000033192	5	2.85714
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	69.1892	serinus_canaria	ENSSCAP00000001372	43.8746	36.4672
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	68.6487	parus_major	ENSPMJP00000021843	41.1141	33.687
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	66.4865	dicentrarchus_labrax	ENSDLAP00005001196	40.2632	32.3684
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	72.4324	pelodiscus_sinensis	ENSPSIP00000013757	47.561	40.8537
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	67.5676	erpetoichthys_calabaricus	ENSECRP00000026161	41.5094	33.6927
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.1892	anolis_carolinensis	ENSACAP00000003555	41.0188	34.3164
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	cyprinodon_variegatus	ENSCVAP00000009539	41.129	33.871
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	67.027	takifugu_rubripes	ENSTRUP00000026468	39.8417	32.7177
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	oryzias_melastigma	ENSOMEP00000035624	36.0849	29.717
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	naja_naja	ENSNNAP00000023270	35.5814	29.3023
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	67.5676	kryptolebias_marmoratus	ENSKMAP00000016008	41.3979	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.1892	neolamprologus_brichardi	ENSNBRP00000025957	42.2652	35.3591
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	78.9189	67.5676	pygocentrus_nattereri	ENSPNAP00000037000	35.9606	30.7882
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	seriola_dumerili	ENSSDUP00000008652	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.1892	scophthalmus_maximus	ENSSMAP00000032258	35.4167	29.6296
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	71.3513	coturnix_japonica	ENSCJPP00005002934	39.5939	33.5025
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.6487	poecilia_latipinna	ENSPLAP00000030865	41.129	34.1398
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	70.8108	podarcis_muralis	ENSPMRP00000032704	41.0188	35.1206
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	amphiprion_ocellaris	ENSAOCP00000004450	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	67.027	cynoglossus_semilaevis	ENSCSEP00000001021	35.6808	29.108
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	69.7297	taeniopygia_guttata	ENSTGUP00000005295	31.6327	26.3265
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	65.4054	nothobranchius_furzeri	ENSNFUP00015051157	40.4762	32.0106
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	72.4324	terrapene_carolina_triunguis	ENSTMTP00000022768	41.8231	35.9249
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	69.1892	geospiza_fortis	ENSGFOP00000016667	43.7853	36.1582
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	65.9459	anabas_testudineus	ENSATEP00000055677	40.5914	32.7957
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	68.1081	salvator_merianae	ENSSMRP00000015825	40.4826	33.7802
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	47.5676	26.4865	saccharomyces_cerevisiae	YOL010W	23.9782	13.3515
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	69.7297	anser_brachyrhynchus	ENSABRP00000025910	41.3793	34.2175
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.0811	67.027	oryzias_sinensis	ENSOSIP00000005349	36.7647	30.3922
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	0.540541	0	ficedula_albicollis	ENSFALP00000020366	0.869565	0
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	69.7297	ficedula_albicollis	ENSFALP00000011018	72.093	60
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	68.6487	acanthochromis_polyacanthus	ENSAPOP00000029620	41.3979	34.1398
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	68.1081	amphilophus_citrinellus	ENSACIP00000027374	41.3979	33.871
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80.5405	66.4865	paramormyrops_kingsleyae	ENSPKIP00000003586	40.0538	33.0645
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	68.6487	aquila_chrysaetos_chrysaetos	ENSACCP00020021103	41.0053	33.5979
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	67.027	hucho_hucho	ENSHHUP00000038710	39.7849	33.3333
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	67.5676	gasterosteus_aculeatus	ENSGACP00000023096	40.5914	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	72.4324	chelonoidis_abingdonii	ENSCABP00000000374	41.555	35.9249
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80.5405	65.9459	denticeps_clupeoides	ENSDCDP00000020035	39.1076	32.021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	69.1892	pundamilia_nyererei	ENSPNYP00000017067	40.8602	34.4086
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	68.6487	scleropages_formosus	ENSSFOP00015036169	40.5914	34.1398
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.1081	larimichthys_crocea	ENSLCRP00005017912	40.3694	33.2454
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.0811	66.4865	betta_splendens	ENSBSLP00000054825	39.5778	32.4538
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	66.4865	mastacembelus_armatus	ENSMAMP00000049905	40.3183	32.626
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.2432	69.1892	labrus_bergylta	ENSLBEP00000005148	43.5028	36.1582
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.027	sander_lucioperca	ENSSLUP00000007194	40.3694	32.7177
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	70.2703	struthio_camelus_australis	ENSSCUP00000006153	46.2908	38.5757
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	67.027	cottoperca_gobio	ENSCGOP00000053985	39.7368	32.6316
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	amphiprion_percula	ENSAPEP00000009635	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	67.5676	cyprinus_carpio_carpio	ENSCCRP00000176078	38.9474	32.8947
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	54.5946	42.7027	cyprinus_carpio_carpio	ENSCCRP00000091654	30.5136	23.8671
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	83.7838	72.4324	gopherus_evgoodei	ENSGEVP00005024540	41.555	35.9249
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	69.1892	maylandia_zebra	ENSMZEP00005023088	40.8602	34.4086
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	68.1081	54.5946	sinocyclocheilus_grahami	ENSSGRP00000103704	36.5217	29.2754
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80	67.027	tetraodon_nigroviridis	ENSTNIP00000016197	39.6783	33.244
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	69.7297	leptobrachium_leishanense	ENSLLEP00000001957	41.129	34.6774
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	seriola_lalandi_dorsalis	ENSSLDP00000028554	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.6487	stegastes_partitus	ENSSPAP00000023907	41.129	34.1398
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	67.5676	oryzias_javanicus	ENSOJAP00000041439	41.129	33.6021
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	80.5405	66.4865	oncorhynchus_tshawytscha	ENSOTSP00005101382	40.0538	33.0645
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	81.6216	65.4054	myripristis_murdjan	ENSMMDP00005052444	39.8417	31.9261
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.7027	68.6487	poecilia_formosa	ENSPFOP00000019808	40.8	33.8667
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	84.3243	69.7297	strigops_habroptila	ENSSHBP00005020632	41.8231	34.5844
ENSJJAG00000000764	jaculus_jaculus	ENSJJAP00000000899	82.1622	67.027	hippocampus_comes	ENSHCOP00000027927	40.8602	33.3333

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression