RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSJHYG00000017314	Gene ID		Accession	-
Symbol		Alias	-	Full Name	poly(A)-specific ribonuclease
Status	Confidence	Length	39049 bases	Strand	Minus strand
Position	QZWM01003803.1 : 9699813 - 9738861	RNA binding domain	RNA_bind , CAF1 , R3H
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSJHYP00000022977	RNA_bind	PF08675	2.3e-33	1
ENSJHYP00000022977	CAF1	PF04857	9.8e-90	2
ENSJHYP00000022977	R3H	PF01424	1.1e-06	3

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSJHYT00000027717	2017	638aa	ENSJHYP00000022977

Gene Model

Click here to download ENSJHYG00000017314's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSJHYG00000017314's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJHYG00000017314

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSJHYG00000017314

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression