Description

Ensembl ID ENSJHYG00000008335 Gene ID Accession -
Symbol Alias - Full Name SMG6 nonsense mediated mRNA decay factor
Status Confidence Length 111818 bases Strand Plus strand
Position QZWM01002973.1 : 4526999 - 4638816 RNA binding domain AARP2CN , EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSJHYP00000010616 AARP2CN PF08142 4.5e-21 1
ENSJHYP00000010632 EST1 PF10374 1.7e-14 1
ENSJHYP00000010632 PIN_4 PF13638 2.6e-20 2
ENSJHYP00000010632 EST1_DNA_bind PF10373 1.5e-59 3
ENSJHYP00000010621 EST1 PF10374 1.7e-14 1
ENSJHYP00000010621 PIN_4 PF13638 2.6e-20 2
ENSJHYP00000010621 EST1_DNA_bind PF10373 1.6e-59 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSJHYT00000012838 3445 814aa ENSJHYP00000010616
- ENSJHYT00000012847 4430 1432aa ENSJHYP00000010621
- ENSJHYT00000012860 4388 1418aa ENSJHYP00000010632

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000008335

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000008335

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression