RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSJHYG00000008152 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
5'-3' exoribonuclease 1 |
Status |
Confidence |
Length |
32662 bases |
Strand |
Plus strand |
Position |
QZWM01000201.1 : 14411306 - 14443967 |
RNA binding domain |
SH3_12 , XRN_N , XRN1_D1 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSJHYP00000013211 |
SH3_12 |
PF18129 |
5.6e-20 |
1 |
ENSJHYP00000013211 |
XRN_N |
PF03159 |
1.8e-94 |
2 |
ENSJHYP00000013211 |
XRN1_D1 |
PF18332 |
6.4e-32 |
3 |
ENSJHYP00000013196 |
SH3_12 |
PF18129 |
5.7e-20 |
1 |
ENSJHYP00000013196 |
XRN_N |
PF03159 |
1.8e-94 |
2 |
ENSJHYP00000013196 |
XRN1_D1 |
PF18332 |
6.4e-32 |
3 |
ENSJHYP00000013120 |
SH3_12 |
PF18129 |
6e-20 |
1 |
ENSJHYP00000013120 |
XRN_N |
PF03159 |
1.9e-94 |
2 |
ENSJHYP00000013120 |
XRN1_D1 |
PF18332 |
5.7e-32 |
3 |
ENSJHYP00000013136 |
SH3_12 |
PF18129 |
6e-20 |
1 |
ENSJHYP00000013136 |
XRN_N |
PF03159 |
1.9e-94 |
2 |
ENSJHYP00000013136 |
XRN1_D1 |
PF18332 |
5.6e-32 |
3 |
ENSJHYP00000013244 |
XRN_N |
PF03159 |
2.5e-94 |
1 |
ENSJHYP00000013244 |
XRN1_D1 |
PF18332 |
1.9e-06 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSJHYT00000015827 |
5031 |
1676aa |
ENSJHYP00000013120 |
- |
ENSJHYT00000015848 |
5025 |
1674aa |
ENSJHYP00000013136 |
- |
ENSJHYT00000015918 |
4857 |
1618aa |
ENSJHYP00000013196 |
- |
ENSJHYT00000015947 |
4824 |
1607aa |
ENSJHYP00000013211 |
- |
ENSJHYT00000015998 |
2898 |
965aa |
ENSJHYP00000013244 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSJHYG00000008152 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSJHYG00000008152 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |