Description

Ensembl ID ENSJHYG00000008152 Gene ID Accession -
Symbol Alias - Full Name 5'-3' exoribonuclease 1
Status Confidence Length 32662 bases Strand Plus strand
Position QZWM01000201.1 : 14411306 - 14443967 RNA binding domain SH3_12 , XRN_N , XRN1_D1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSJHYP00000013211 SH3_12 PF18129 5.6e-20 1
ENSJHYP00000013211 XRN_N PF03159 1.8e-94 2
ENSJHYP00000013211 XRN1_D1 PF18332 6.4e-32 3
ENSJHYP00000013196 SH3_12 PF18129 5.7e-20 1
ENSJHYP00000013196 XRN_N PF03159 1.8e-94 2
ENSJHYP00000013196 XRN1_D1 PF18332 6.4e-32 3
ENSJHYP00000013120 SH3_12 PF18129 6e-20 1
ENSJHYP00000013120 XRN_N PF03159 1.9e-94 2
ENSJHYP00000013120 XRN1_D1 PF18332 5.7e-32 3
ENSJHYP00000013136 SH3_12 PF18129 6e-20 1
ENSJHYP00000013136 XRN_N PF03159 1.9e-94 2
ENSJHYP00000013136 XRN1_D1 PF18332 5.6e-32 3
ENSJHYP00000013244 XRN_N PF03159 2.5e-94 1
ENSJHYP00000013244 XRN1_D1 PF18332 1.9e-06 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSJHYT00000015827 5031 1676aa ENSJHYP00000013120
- ENSJHYT00000015848 5025 1674aa ENSJHYP00000013136
- ENSJHYT00000015918 4857 1618aa ENSJHYP00000013196
- ENSJHYT00000015947 4824 1607aa ENSJHYP00000013211
- ENSJHYT00000015998 2898 965aa ENSJHYP00000013244

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000008152

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000008152

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression