Description

Ensembl ID ENSJHYG00000000594 Gene ID Accession -
Symbol Alias - Full Name SMG5 nonsense mediated mRNA decay factor
Status Confidence Length 31150 bases Strand Minus strand
Position QZWM01001653.1 : 2356995 - 2388144 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSJHYP00000000680 EST1 PF10374 6.8e-22 1
ENSJHYP00000000680 PIN_4 PF13638 9e-07 2
ENSJHYP00000000680 EST1_DNA_bind PF10373 2.3e-34 3
ENSJHYP00000000680 EST1_DNA_bind PF10373 2.3e-34 4
ENSJHYP00000000636 EST1 PF10374 7.2e-22 1
ENSJHYP00000000636 PIN_4 PF13638 1e-06 2
ENSJHYP00000000636 EST1_DNA_bind PF10373 1.8e-39 3
ENSJHYP00000000636 EST1_DNA_bind PF10373 1.8e-39 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSJHYT00000000819 5796 1049aa ENSJHYP00000000636
- ENSJHYT00000000874 5658 1003aa ENSJHYP00000000680

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000000594

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSJHYG00000000594

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression