RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSHHUG00000020030	Gene ID		Accession	-
Symbol	wu	Alias	-	Full Name	wu:fj05g07
Status	Confidence	Length	11677 bases	Strand	Plus strand
Position	QNTS01000004.1 : 2352432 - 2364108	RNA binding domain	SUI1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSHHUP00000031640	SUI1	PF01253	8.4e-29	1
ENSHHUP00000031593	SUI1	PF01253	1.7e-27	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSHHUT00000032897	2727	658aa	ENSHHUP00000031593
-	ENSHHUT00000032903	2672	593aa	ENSHHUP00000031599
-	ENSHHUT00000032929	2152	500aa	ENSHHUP00000031625
-	ENSHHUT00000032944	1121	113aa	ENSHHUP00000031640

Gene Model

Click here to download ENSHHUG00000020030's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSHHUG00000020030's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000013125	73.499	65.2174	hucho_hucho	ENSHHUP00000031593	53.9514	47.8723
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000003683	81.4035	72.4561	hucho_hucho	ENSHHUP00000031593	70.5167	62.766
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000086412	26.7692	12.4615	hucho_hucho	ENSHHUP00000031593	26.4438	12.31
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000086402	34.3545	18.1619	hucho_hucho	ENSHHUP00000031593	23.8602	12.614
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000075441	49.4949	24.2424	hucho_hucho	ENSHHUP00000031593	14.8936	7.29483
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000016549	40.7407	24.4444	hucho_hucho	ENSHHUP00000031593	16.7173	10.0304
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000013827	41.4894	24.8227	hucho_hucho	ENSHHUP00000031593	17.7812	10.6383
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000030996	47.2637	31.675	hucho_hucho	ENSHHUP00000031593	43.3131	29.0274
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000009133	45.1939	32.0405	hucho_hucho	ENSHHUP00000031593	40.7295	28.8754

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	32.9787	18.541	caenorhabditis_elegans	C13B4.1d.1	21.1707	11.9024
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	16.7173	8.81459	caenorhabditis_elegans	M03A1.3.1	31.25	16.4773
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	18.2371	10.4863	caenorhabditis_elegans	M03A1.8.1	31.4136	18.0628
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	21.8845	12.31	caenorhabditis_elegans	C05D12.1.1	28.9157	16.2651
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	15.1976	7.44681	caenorhabditis_elegans	Y57G11A.4.2	38.1679	18.7023
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	38.7538	23.2523	drosophila_melanogaster	FBpp0309032	38.872	23.3232
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	11.8541	6.99088	drosophila_melanogaster	FBpp0310269	49.0566	28.9308
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	11.0942	6.07903	drosophila_melanogaster	FBpp0084758	43.4524	23.8095
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	15.1976	7.59878	ciona_intestinalis	ENSCINP00000030086	36.1011	18.0505
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	18.845	10.6383	ciona_intestinalis	ENSCINP00000019371	35.4286	20
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	35.2584	21.4286	ciona_intestinalis	ENSCINP00000017029	37.4798	22.7787
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	52.8875	38.9058	callorhinchus_milii	ENSCMIP00000008995	58.9831	43.3898
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	45.5927	31.6109	callorhinchus_milii	ENSCMIP00000008986	55.8659	38.7337
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.383	42.5532	lepisosteus_oculatus	ENSLOCP00000001330	62.4579	47.138
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.9909	44.2249	clupea_harengus	ENSCHAP00000047265	70.7547	54.9057
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.9909	42.2492	danio_rerio	ENSDARP00000082157	65.7895	48.7719
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.2401	35.8663	astyanax_mexicanus	ENSAMXP00000010820	62.1881	45.2975
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	41.9453	32.3708	astyanax_mexicanus	ENSAMXP00000020045	68.3168	52.7228
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.6869	41.9453	carassius_auratus	ENSCARP00000134182	67.2072	49.7297
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.4468	43.0091	carassius_auratus	ENSCARP00000089515	67.5	50.5357
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.7508	43.769	carassius_auratus	ENSCARP00000089497	67.4956	51.1545
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.9119	38.2979	carassius_auratus	ENSCARP00000084079	66.6004	50.0994
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.696	33.5866	ictalurus_punctatus	ENSIPUP00000005715	56.6724	38.3016
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.5988	43.465	electrophorus_electricus	ENSEEEP00000011018	68.2883	51.5315
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	76.1398	71.2766	oncorhynchus_kisutch	ENSOKIP00005087324	86.9792	81.4236
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	62.614	50.9119	esox_lucius	ENSELUP00000072369	72.5352	58.9789
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	77.5076	73.5562	oncorhynchus_mykiss	ENSOMYP00000014525	88.5417	84.0278
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	75.076	70.6687	salmo_salar	ENSSSAP00000088918	87.2792	82.1555
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	77.6596	73.5562	salmo_trutta	ENSSTUP00000018694	89.4921	84.7636
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	58.0547	43.617	gadus_morhua	ENSGMOP00000010320	64.7458	48.6441
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	41.4894	31.155	fundulus_heteroclitus	ENSFHEP00000021523	66.2621	49.7573
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	53.4954	36.3222	xiphophorus_maculatus	ENSXMAP00000036398	61.9718	42.0775
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	34.0426	21.7325	poecilia_reticulata	ENSPREP00000025043	57.732	36.8557
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	51.3678	39.2097	cyclopterus_lumpus	ENSCLMP00005014380	59.4025	45.3427
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.231	42.2492	oreochromis_niloticus	ENSONIP00000010796	58.5443	43.9873
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.383	42.4012	oreochromis_niloticus	ENSONIP00000002870	63.5274	47.774
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	58.2067	44.2249	oreochromis_niloticus	ENSONIP00000054532	66.4931	50.5208
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.3921	36.4742	haplochromis_burtoni	ENSHBUP00000026475	63.1068	46.6019
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.4468	43.769	haplochromis_burtoni	ENSHBUP00000007728	65.7391	50.087
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	54.8632	43.769	lates_calcarifer	ENSLCAP00010044305	69.4231	55.3846
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.1429	43.465	astatotilapia_calliptera	ENSACLP00000014950	65.3913	49.7391
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.6079	36.7781	astatotilapia_calliptera	ENSACLP00000014321	64.786	47.0817
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	45.7447	31.459	xenopus_tropicalis	ENSXETP00000108898	50.2504	34.5576
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	41.0334	30.5471	xenopus_tropicalis	ENSXETP00000114336	55.2147	41.1043
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.0881	35.1064	xenopus_tropicalis	ENSXETP00000101934	57.8853	41.3979
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.0243	33.8906	crocodylus_porosus	ENSCPRP00005020830	57.2464	40.3986
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	34.8024	26.8997	chrysemys_picta_bellii	ENSCPBP00000038608	64.507	49.8592
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	16.4134	9.27052	laticauda_laticaudata	ENSLLTP00000016754	34.6154	19.5513
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	20.9726	11.5502	gallus_gallus	ENSGALP00010035549	13.0189	7.16981
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	16.5653	9.72644	meleagris_gallopavo	ENSMGAP00000030783	30.791	18.0791
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	11.7021	5.92705	ornithorhynchus_anatinus	ENSOANP00000033076	17.1111	8.66667
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	33.8906	24.1641	sarcophilus_harrisii	ENSSHAP00000036145	58.6842	41.8421
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	13.2219	8.81459	parus_major	ENSPMJP00000026452	37.8261	25.2174
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	60.9422	47.8723	dicentrarchus_labrax	ENSDLAP00005016720	68.6644	53.9384
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	51.2158	38.1459	pelodiscus_sinensis	ENSPSIP00000016106	56.4489	42.0436
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	53.3435	38.1459	erpetoichthys_calabaricus	ENSECRP00000025023	59.8976	42.8328
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	51.5198	38.2979	erpetoichthys_calabaricus	ENSECRP00000024968	59.0592	43.9024
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.7842	34.8024	anolis_carolinensis	ENSACAP00000005658	52.2801	37.2964
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	44.9848	32.5228	cyprinodon_variegatus	ENSCVAP00000032355	63.7931	46.1207
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	29.0274	19.7568	vombatus_ursinus	ENSVURP00010001435	52.1858	35.5191
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.6231	40.2736	oryzias_melastigma	ENSOMEP00000027191	66.4247	48.0944
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	39.3617	30.2432	neolamprologus_brichardi	ENSNBRP00000006335	67.624	51.9582
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	14.8936	8.66261	naja_naja	ENSNNAP00000004356	31.8182	18.5065
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	58.2067	44.6809	kryptolebias_marmoratus	ENSKMAP00000029752	67.0753	51.4886
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	47.4164	32.9787	phascolarctos_cinereus	ENSPCIP00000047168	56.0144	38.9587
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.9362	38.2979	seriola_dumerili	ENSSDUP00000028781	64.9194	50.8064
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	39.2097	31.307	pygocentrus_nattereri	ENSPNAP00000026916	67.5393	53.9267
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.848	38.7538	pygocentrus_nattereri	ENSPNAP00000011075	67.6289	52.5773
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	42.8571	32.8267	pygocentrus_nattereri	ENSPNAP00000011014	62.6667	48
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	39.2097	25.228	poecilia_formosa	ENSPFOP00000013525	64.6617	41.604
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	25.3799	15.6535	ciona_savignyi	ENSCSAVP00000007589	43.0412	26.5464
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	53.9514	40.1216	scophthalmus_maximus	ENSSMAP00000008433	67.619	50.2857
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.9271	44.9848	cottoperca_gobio	ENSCGOP00000043194	68.5289	55.121
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.5441	37.9939	labrus_bergylta	ENSLBEP00000036097	69.2144	53.0786
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	51.5198	38.4498	amphilophus_citrinellus	ENSACIP00000007388	64.6947	48.2824
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.4559	36.4742	amphilophus_citrinellus	ENSACIP00000013475	62.7599	45.3686
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	31.307	24.3161	hippocampus_comes	ENSHCOP00000004594	57.7031	44.8179
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.1429	43.3131	scleropages_formosus	ENSSFOP00015008881	66.7851	50.6217
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.9362	35.2584	amphiprion_ocellaris	ENSAOCP00000010034	62.1622	44.7876
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.0243	34.9544	anabas_testudineus	ENSATEP00000025202	63.3267	46.0922
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	58.8146	43.465	anabas_testudineus	ENSATEP00000025123	64.1791	47.4295
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	59.5745	45.7447	mastacembelus_armatus	ENSMAMP00000028429	66.7802	51.2777
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.2948	45.2888	mastacembelus_armatus	ENSMAMP00000032623	69.3015	54.7794
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.4711	41.4894	denticeps_clupeoides	ENSDCDP00000000289	67.5926	50.5556
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.6231	41.6413	denticeps_clupeoides	ENSDCDP00000029843	66.9104	50.0914
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	34.6505	25.6839	betta_splendens	ENSBSLP00000007463	58.0153	43.0025
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	38.9058	27.9635	betta_splendens	ENSBSLP00000007556	61.0979	43.9141
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	37.69	28.1155	betta_splendens	ENSBSLP00000007537	50	37.2984
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	53.3435	39.2097	betta_splendens	ENSBSLP00000007393	64.7601	47.6015
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	47.1125	37.538	seriola_lalandi_dorsalis	ENSSLDP00000010854	69.0423	55.0111
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.8389	44.0729	myripristis_murdjan	ENSMMDP00005055918	70.8333	54.9242
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	18.997	11.5502	podarcis_muralis	ENSPMRP00000016552	21.4408	13.036
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	15.5015	8.51064	podarcis_muralis	ENSPMRP00000007315	26.4249	14.5078
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.7751	42.8571	sander_lucioperca	ENSSLUP00000056670	65.7706	50.5376
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	76.1398	71.5805	oncorhynchus_tshawytscha	ENSOTSP00005015335	86.9792	81.7708
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.4802	34.4985	paramormyrops_kingsleyae	ENSPKIP00000024524	62.9191	44.7732
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	54.1033	41.4894	cynoglossus_semilaevis	ENSCSEP00000014270	63.5714	48.75
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.6079	36.9301	pundamilia_nyererei	ENSPNYP00000018258	64.786	47.2763
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	43.3131	32.9787	pundamilia_nyererei	ENSPNYP00000023895	66.4336	50.5828
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.4802	34.1945	nothobranchius_furzeri	ENSNFUP00015037752	65.102	45.9184
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	39.3617	28.5714	maylandia_zebra	ENSMZEP00005023516	65.2393	47.3552
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.4802	34.9544	maylandia_zebra	ENSMZEP00005030089	59.6262	42.9907
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	46.9605	34.6505	maylandia_zebra	ENSMZEP00005018051	63.4497	46.8172
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	53.4954	40.1216	sinocyclocheilus_grahami	ENSSGRP00000100063	64.351	48.2633
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.304	38.9058	acanthochromis_polyacanthus	ENSAPOP00000011244	68.3884	52.8926
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	56.6869	42.0973	amphiprion_percula	ENSAPEP00000016882	66.7263	49.5528
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	49.5441	36.9301	terrapene_carolina_triunguis	ENSTMTP00000017081	58.7387	43.7838
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	16.8693	11.3982	terrapene_carolina_triunguis	ENSTMTP00000004181	47.0339	31.7797
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	31.459	24.1641	terrapene_carolina_triunguis	ENSTMTP00000004164	61.0619	46.9027
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	50.304	38.1459	stegastes_partitus	ENSSPAP00000024330	67.8279	51.4344
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	57.4468	42.7052	cyprinus_carpio_carpio	ENSCCRP00000109826	67.6208	50.2683
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	55.0152	39.6657	oryzias_javanicus	ENSOJAP00000047193	65.8182	47.4545
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	48.7842	35.2584	leptobrachium_leishanense	ENSLLEP00000034907	55.7292	40.2778
ENSHHUG00000020030	hucho_hucho	ENSHHUP00000031593	51.2158	38.6018	leptobrachium_leishanense	ENSLLEP00000035284	57.2156	43.1239

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression