RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSHGLG00100012433	Gene ID		Accession	-
Symbol		Alias	-	Full Name	procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
Status	Confidence	Length	20731 bases	Strand	Minus strand
Position	JH173407.1 : 583887 - 604617	RNA binding domain	2OG-FeII_Oxy
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSHGLP00100016852	2OG-FeII_Oxy	PF03171	2.8e-07	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSHGLT00100017033	3306	701aa	ENSHGLP00100016852

Gene Model

Click here to download ENSHGLG00100012433's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSHGLG00100012433's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHGLG00100012433

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHGLG00100012433

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression