RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSHCOG00000005872	Gene ID	109513133	Accession	-
Symbol	mrps21	Alias	-	Full Name	28S ribosomal protein S21, mitochondrial-like
Status	Confidence	Length	804 bases	Strand	Plus strand
Position	KV879841.1 : 60740 - 61543	RNA binding domain	Ribosomal_S21
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSHCOP00000020060	Ribosomal_S21	PF01165	3.7e-17	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
mrps21-201	ENSHCOT00000007142	264	87aa	ENSHCOP00000020060

Gene Model

Click here to download ENSHCOG00000005872's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSHCOG00000005872's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020028	100	100	hippocampus_comes	ENSHCOP00000020060	100	100

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	87.3563	fundulus_heteroclitus	ENSFHEP00000011053	93.1034	87.3563
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	82.7586	poecilia_reticulata	ENSPREP00000028092	91.954	82.7586
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	90.8046	81.6092	xiphophorus_maculatus	ENSXMAP00000041740	90.8046	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	83.908	cyclopterus_lumpus	ENSCLMP00005033701	93.1034	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	81.6092	oreochromis_niloticus	ENSONIP00000028168	94.2529	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	81.6092	haplochromis_burtoni	ENSHBUP00000018121	94.2529	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	95.4023	86.2069	oryzias_latipes	ENSORLP00000044045	95.4023	86.2069
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	77.0115	sparus_aurata	ENSSAUP00010013398	91.954	77.0115
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	81.6092	astatotilapia_calliptera	ENSACLP00000014148	94.2529	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	79.3103	lates_calcarifer	ENSLCAP00010047935	89.6552	79.3103
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	83.908	cyprinodon_variegatus	ENSCVAP00000015223	93.1034	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	85.0575	68.9655	dicentrarchus_labrax	ENSDLAP00005005361	64.9123	52.6316
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	95.4023	86.2069	oryzias_melastigma	ENSOMEP00000005921	95.4023	86.2069
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	88.5057	78.1609	kryptolebias_marmoratus	ENSKMAP00000016004	88.5057	78.1609
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	81.6092	takifugu_rubripes	ENSTRUP00000050951	91.954	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	81.6092	poecilia_formosa	ENSPFOP00000008654	91.954	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	77.0115	scophthalmus_maximus	ENSSMAP00000004196	91.954	77.0115
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	68.9655	57.4713	seriola_dumerili	ENSSDUP00000025700	61.8557	51.5464
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	86.2069	67.8161	cottoperca_gobio	ENSCGOP00000030194	86.2069	67.8161
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	81.6092	poecilia_latipinna	ENSPLAP00000015475	91.954	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	82.7586	amphilophus_citrinellus	ENSACIP00000014149	94.2529	82.7586
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	83.908	labrus_bergylta	ENSLBEP00000035883	94.2529	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	90.8046	87.3563	anabas_testudineus	ENSATEP00000056620	90.8046	87.3563
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	85.0575	acanthochromis_polyacanthus	ENSAPOP00000004293	91.954	85.0575
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	88.5057	75.8621	gasterosteus_aculeatus	ENSGACP00000004307	88.5057	75.8621
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	94.2529	81.6092	maylandia_zebra	ENSMZEP00005035480	94.2529	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	83.908	amphiprion_ocellaris	ENSAOCP00000026155	89.6552	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	80.4598	mastacembelus_armatus	ENSMAMP00000050692	93.1034	80.4598
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	72.4138	59.7701	oryzias_sinensis	ENSOSIP00000006071	74.1176	61.1765
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	80.4598	pundamilia_nyererei	ENSPNYP00000015128	93.1034	80.4598
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	82.7586	67.8161	cynoglossus_semilaevis	ENSCSEP00000012219	82.7586	67.8161
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	95.4023	82.7586	oryzias_javanicus	ENSOJAP00000010451	67.4797	58.5366
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	77.0115	betta_splendens	ENSBSLP00000033543	89.6552	77.0115
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	79.3103	larimichthys_crocea	ENSLCRP00005050589	65.8537	56.0976
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	79.3103	nothobranchius_furzeri	ENSNFUP00015040893	91.954	79.3103
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	83.908	amphiprion_percula	ENSAPEP00000012751	89.6552	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	83.908	amphiprion_percula	ENSAPEP00000012366	89.6552	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	79.3103	seriola_lalandi_dorsalis	ENSSLDP00000017750	89.6552	79.3103
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	73.5632	59.7701	neolamprologus_brichardi	ENSNBRP00000022850	71.9101	58.427
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	93.1034	83.908	sander_lucioperca	ENSSLUP00000027833	93.1034	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	88.5057	78.1609	stegastes_partitus	ENSSPAP00000004571	88.5057	78.1609
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	70.1149	48.2759	eptatretus_burgeri	ENSEBUP00000011686	35.8824	24.7059
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	59.7701	45.977	eptatretus_burgeri	ENSEBUP00000010813	46.8468	36.036
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	90.8046	75.8621	clupea_harengus	ENSCHAP00000026668	82.2917	68.75
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	87.3563	73.5632	danio_rerio	ENSDARP00000095428	87.3563	73.5632
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	75.8621	carassius_auratus	ENSCARP00000033095	91.954	75.8621
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	77.0115	carassius_auratus	ENSCARP00000047743	91.954	77.0115
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	77.0115	carassius_auratus	ENSCARP00000050610	91.954	77.0115
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	86.2069	75.8621	astyanax_mexicanus	ENSAMXP00000032572	86.2069	75.8621
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	81.6092	ictalurus_punctatus	ENSIPUP00000011964	91.954	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	82.7586	electrophorus_electricus	ENSEEEP00000013608	84.7826	78.2609
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	83.908	esox_lucius	ENSELUP00000065989	75.7282	70.8738
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	85.0575	oncorhynchus_mykiss	ENSOMYP00000051792	91.954	85.0575
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	83.908	salmo_trutta	ENSSTUP00000079412	91.954	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	81.6092	gadus_morhua	ENSGMOP00000032575	89.6552	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	82.7586	66.6667	anas_platyrhynchos_platyrhynchos	ENSAPLP00000021684	82.7586	66.6667
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	86.2069	67.8161	meleagris_gallopavo	ENSMGAP00000000077	86.2069	67.8161
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	79.3103	60.9195	serinus_canaria	ENSSCAP00000016333	79.3103	60.9195
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	86.2069	66.6667	gallus_gallus	ENSGALP00010042733	18.75	14.5
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	80.4598	60.9195	parus_major	ENSPMJP00000002101	80.4598	60.9195
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	88.5057	80.4598	pygocentrus_nattereri	ENSPNAP00000011410	88.5057	80.4598
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	79.3103	60.9195	taeniopygia_guttata	ENSTGUP00000037973	12.3878	9.51526
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	83.908	hucho_hucho	ENSHHUP00000056707	91.954	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	83.908	oncorhynchus_tshawytscha	ENSOTSP00005100511	91.954	83.908
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	86.2069	66.6667	coturnix_japonica	ENSCJPP00005018631	86.2069	66.6667
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	74.7126	sinocyclocheilus_grahami	ENSSGRP00000110569	91.954	74.7126
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	90.8046	73.5632	sinocyclocheilus_grahami	ENSSGRP00000059263	90.8046	73.5632
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	81.6092	64.3678	strigops_habroptila	ENSSHBP00005017356	61.2069	48.2759
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	83.908	64.3678	aquila_chrysaetos_chrysaetos	ENSACCP00020004170	83.908	64.3678
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	78.1609	denticeps_clupeoides	ENSDCDP00000043533	89.6552	78.1609
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	81.6092	64.3678	anser_brachyrhynchus	ENSABRP00000025395	81.6092	64.3678
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	91.954	75.8621	scleropages_formosus	ENSSFOP00015034497	34.0426	28.0851
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	81.6092	myripristis_murdjan	ENSMMDP00005041227	89.6552	81.6092
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	89.6552	74.7126	paramormyrops_kingsleyae	ENSPKIP00000029041	89.6552	74.7126
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	74.7126	55.1724	cyprinus_carpio_carpio	ENSCCRP00000139475	80.2469	59.2593
ENSHCOG00000005872	hippocampus_comes	ENSHCOP00000020060	72.4138	54.023	cyprinus_carpio_carpio	ENSCCRP00000125433	60	44.7619

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression