RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	ENSGWIG00000018902	Gene ID	114458174	Accession	-
Symbol		Alias	-	Full Name	cleavage and polyadenylation specificity factor subunit 3-like
Status	Confidence	Length	11691 bases	Strand	Plus strand
Position	CAAAFV010000234.1 : 4370369 - 4382059	RNA binding domain	Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGWIP00000036737	Lactamase_B	PF00753	9.3e-18	1
ENSGWIP00000036737	Beta-Casp	PF10996	6.1e-31	2
ENSGWIP00000036737	CPSF73-100_C	PF11718	2.3e-49	3
ENSGWIP00000036737	RMMBL	PF07521	1.4e-14	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSGWIT00000040027	2283	695aa	ENSGWIP00000036737

Gene Model

Click here to download ENSGWIG00000018902's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGWIG00000018902's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGWIG00000018902

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGWIG00000018902

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression