RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSGMOG00000006782	Gene ID	115552627	Accession	-
Symbol		Alias	-	Full Name	heparin-binding EGF-like growth factor a
Status	Confidence	Length	17445 bases	Strand	Minus strand
Position	10 : 17194756 - 17212200	RNA binding domain	zf-RNPHF , RRM_1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGMOP00000023728	zf-RNPHF	PF08080	1.3e-07	1
ENSGMOP00000023728	RRM_1	PF00076	5.4e-31	2
ENSGMOP00000023728	RRM_1	PF00076	5.4e-31	3
ENSGMOP00000023728	RRM_1	PF00076	5.4e-31	4
ENSGMOP00000007223	zf-RNPHF	PF08080	1.6e-07	1
ENSGMOP00000007223	RRM_1	PF00076	4.6e-31	2
ENSGMOP00000007223	RRM_1	PF00076	4.6e-31	3
ENSGMOP00000007223	RRM_1	PF00076	4.6e-31	4
ENSGMOP00000040377	zf-RNPHF	PF08080	1.6e-07	1
ENSGMOP00000040377	RRM_1	PF00076	5.6e-31	2
ENSGMOP00000040377	RRM_1	PF00076	5.6e-31	3
ENSGMOP00000040377	RRM_1	PF00076	5.6e-31	4
ENSGMOP00000068463	zf-RNPHF	PF08080	2.9e-07	1
ENSGMOP00000068463	RRM_1	PF00076	2.6e-30	2
ENSGMOP00000068463	RRM_1	PF00076	2.6e-30	3
ENSGMOP00000068463	RRM_1	PF00076	2.6e-30	4

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSGMOT00000031146	2999	597aa	ENSGMOP00000068463
-	ENSGMOT00000007453	1880	234aa	ENSGMOP00000007248
-	ENSGMOT00000070340	1292	410aa	ENSGMOP00000040377
-	ENSGMOT00000061747	2081	407aa	ENSGMOP00000023728
-	ENSGMOT00000007427	1200	399aa	ENSGMOP00000007223

Gene Model

Click here to download ENSGMOG00000006782's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGMOG00000006782's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000032672	82.1782	74.7525	gadus_morhua	ENSGMOP00000068463	55.6114	50.5863
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000037592	25.2044	16.8937	gadus_morhua	ENSGMOP00000068463	30.9883	20.7705
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000015015	49.0521	31.5166	gadus_morhua	ENSGMOP00000068463	34.6734	22.2781
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000052208	24.7368	16.4474	gadus_morhua	ENSGMOP00000068463	31.4908	20.938
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000013290	69.0909	58.961	gadus_morhua	ENSGMOP00000068463	44.5561	38.0234
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000039890	24.3243	12.3123	gadus_morhua	ENSGMOP00000068463	27.1357	13.7353

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	26.8007	17.4204	caenorhabditis_elegans	Y73B6BL.33a.1	26.2295	17.0492
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	24.4556	12.8978	caenorhabditis_elegans	Y106G6D.7.1	15.4008	8.12236
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	25.2931	15.2429	caenorhabditis_elegans	ZK1067.6a.1	24.4337	14.7249
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	35.3434	23.9531	drosophila_melanogaster	FBpp0428434	36.0068	24.4027
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	27.6382	16.2479	drosophila_melanogaster	FBpp0086479	17.0631	10.031
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	22.7806	13.2328	ciona_intestinalis	ENSCINP00000002125	12.6512	7.34884
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	28.6432	20.1005	ciona_intestinalis	ENSCINP00000033704	23.1394	16.2382
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	47.9062	40.536	callorhinchus_milii	ENSCMIP00000019576	63.2743	53.5398
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.124	53.7688	lepisosteus_oculatus	ENSLOCP00000015406	74.1453	68.5897
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.7889	53.6013	clupea_harengus	ENSCHAP00000036819	79.3103	73.5632
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.2864	53.7688	danio_rerio	ENSDARP00000059917	84.8635	79.6526
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	23.6181	18.4255	carassius_auratus	ENSCARP00000135650	68.7805	53.6585
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.2864	53.6013	carassius_auratus	ENSCARP00000067685	78.9838	73.903
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	56.9514	53.4338	carassius_auratus	ENSCARP00000051725	79.6253	74.7073
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.4539	53.9363	astyanax_mexicanus	ENSAMXP00000005848	83.8631	78.7286
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	56.7839	53.4338	ictalurus_punctatus	ENSIPUP00000026963	82.6829	77.8049
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	55.6114	electrophorus_electricus	ENSEEEP00000004237	69.9422	63.9692
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.799	56.7839	esox_lucius	ENSELUP00000005707	88.1481	83.7037
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.6265	55.6114	oncorhynchus_kisutch	ENSOKIP00005063951	82.1596	77.9343
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.2965	56.1139	oncorhynchus_kisutch	ENSOKIP00005089984	85.9223	81.3107
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.129	55.9464	oncorhynchus_mykiss	ENSOMYP00000025111	85.6796	81.068
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.794	55.9464	oncorhynchus_mykiss	ENSOMYP00000042843	81.4385	77.4942
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.794	55.7789	salmo_trutta	ENSSTUP00000101406	86.0294	81.6176
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.464	56.1139	salmo_trutta	ENSSTUP00000003355	85.9564	81.1138
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.464	56.1139	salmo_salar	ENSSSAP00000035081	85.9564	81.1138
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.2915	55.1089	salmo_salar	ENSSSAP00000029268	74.5182	70.4497
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.794	xiphophorus_maculatus	ENSXMAP00000025969	95.2756	92.126
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	54.1039	52.5963	astatotilapia_calliptera	ENSACLP00000005062	86.828	84.4086
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	18.0905	14.4054	bos_taurus	ENSBTAP00000055893	64.6707	51.497
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.134	56.6164	fundulus_heteroclitus	ENSFHEP00000025928	89.0819	83.871
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.3065	58.9615	sparus_aurata	ENSSAUP00010010192	89.4865	86.0636
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	39.6985	35.5109	macaca_nemestrina	ENSMNEP00000012500	60.7692	54.359
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	54.1039	52.5963	haplochromis_burtoni	ENSHBUP00000009024	87.5339	85.0948
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	55.1089	50.0838	anolis_carolinensis	ENSACAP00000036516	51.811	47.0866
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.139	58.2915	cyclopterus_lumpus	ENSCLMP00005030568	82.9545	79.0909
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.6415	58.6265	kryptolebias_marmoratus	ENSKMAP00000025393	87.8282	83.5322
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	54.7739	50.0838	xenopus_tropicalis	ENSXETP00000059076	74.1497	67.8005
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.2915	poecilia_latipinna	ENSPLAP00000009076	89.6552	85.7143
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	seriola_dumerili	ENSSDUP00000012087	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	54.1039	52.5963	neolamprologus_brichardi	ENSNBRP00000020009	87.5339	85.0948
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	7.37018	5.36013	monodelphis_domestica	ENSMODP00000002674	60.274	43.8356
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	32.3283	24.6231	monodelphis_domestica	ENSMODP00000055384	53.3149	40.6077
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.459	oryzias_melastigma	ENSOMEP00000027387	88.9706	85.5392
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.9615	57.2864	amphilophus_citrinellus	ENSACIP00000011491	91.6667	89.0625
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.3065	58.9615	oryzias_sinensis	ENSOSIP00000030338	88.6199	85.23
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	22.6131	11.7253	ciona_savignyi	ENSCSAVP00000001587	13.0941	6.78952
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	21.7755	17.5879	ciona_savignyi	ENSCSAVP00000018451	46.595	37.6344
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	27.9732	19.7655	ciona_savignyi	ENSCSAVP00000003458	24.238	17.1263
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.134	57.7889	scophthalmus_maximus	ENSSMAP00000012787	82.5287	79.3103
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	19.7655	15.4104	bos_grunniens	ENSBGRP00000026043	63.1016	49.1979
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	larimichthys_crocea	ENSLCRP00005050236	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	57.9564	labrus_bergylta	ENSLBEP00000037263	89.1892	85.0123
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.134	57.4539	takifugu_rubripes	ENSTRUP00000052315	88.4236	84.4828
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.134	57.2864	gasterosteus_aculeatus	ENSGACP00000024266	86.715	82.6087
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	betta_splendens	ENSBSLP00000015602	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.2915	poecilia_formosa	ENSPFOP00000004035	89.6552	85.7143
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.2915	53.9363	erpetoichthys_calabaricus	ENSECRP00000013712	73.2632	67.7895
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.459	acanthochromis_polyacanthus	ENSAPOP00000013765	89.1892	85.7494
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	amphiprion_ocellaris	ENSAOCP00000004943	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.129	55.9464	hippocampus_comes	ENSHCOP00000019287	84.2482	79.7136
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	18.928	14.7404	bos_indicus_hybrid	ENSBIXP00005018627	60.7527	47.3118
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.9665	57.7889	mastacembelus_armatus	ENSMAMP00000016967	86.8932	83.7379
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.134	57.6214	cynoglossus_semilaevis	ENSCSEP00000024875	87.7751	84.1076
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.459	pundamilia_nyererei	ENSPNYP00000000269	89.6552	85.9606
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.459	poecilia_reticulata	ENSPREP00000008502	89.6552	85.9606
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	53.6013	49.9162	cottoperca_gobio	ENSCGOP00000007016	84.8806	79.0451
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.6214	53.7688	pygocentrus_nattereri	ENSPNAP00000023211	84.1076	78.4841
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	seriola_lalandi_dorsalis	ENSSLDP00000013409	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.6365	58.124	anabas_testudineus	ENSATEP00000038212	81.3483	77.9775
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	21.608	18.258	sinocyclocheilus_grahami	ENSSGRP00000045623	83.7662	70.7792
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	56.9514	53.6013	sinocyclocheilus_grahami	ENSSGRP00000081486	80.9524	76.1905
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	51.0888	46.9012	oncorhynchus_tshawytscha	ENSOTSP00005080617	82.4324	75.6757
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.794	55.7789	oncorhynchus_tshawytscha	ENSOTSP00005055041	86.0294	81.6176
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.6265	lates_calcarifer	ENSLCAP00010018968	89.1892	85.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.6265	dicentrarchus_labrax	ENSDLAP00005063377	86.052	82.7423
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.474	59.129	oryzias_latipes	ENSORLP00000008709	88.862	85.4722
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.459	maylandia_zebra	ENSMZEP00005013035	89.6552	85.9606
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.474	58.794	sander_lucioperca	ENSSLUP00000022015	89.731	85.8191
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.139	58.794	stegastes_partitus	ENSSPAP00000013078	89.6806	86.2408
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.459	amphiprion_percula	ENSAPEP00000018174	89.1892	85.7494
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	61.809	59.464	myripristis_murdjan	ENSMMDP00005051986	89.3462	85.9564
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.2965	56.1139	hucho_hucho	ENSHHUP00000055287	86.9779	82.3096
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	58.6265	55.7789	hucho_hucho	ENSHHUP00000087858	85.9951	81.8182
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.6365	57.6214	cyprinodon_variegatus	ENSCVAP00000011771	89.1626	84.7291
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	55.9464	50.5863	paramormyrops_kingsleyae	ENSPKIP00000027514	72.2944	65.368
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.1189	53.4338	cyprinus_carpio_carpio	ENSCCRP00000156851	83.3741	77.9951
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	57.4539	53.2663	cyprinus_carpio_carpio	ENSCCRP00000098479	83.0508	76.9976
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.804	58.459	oryzias_javanicus	ENSOJAP00000032956	88.9706	85.5392
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	59.9665	57.7889	nothobranchius_furzeri	ENSNFUP00015002111	87.7451	84.5588
ENSGMOG00000006782	gadus_morhua	ENSGMOP00000068463	60.9715	58.6265	oreochromis_niloticus	ENSONIP00000022384	89.6552	86.2069

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression