RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	ENSGGOG00000016754	Gene ID		Accession	-
Symbol	EDDM3A	Alias	-	Full Name	epididymal protein 3A
Status	Confidence	Length	444 bases	Strand	Minus strand
Position	14 : 24639637 - 24640080	RNA binding domain	RnaseA
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGGOP00000016339	RnaseA	PF00074	5.7e-06	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
EDDM3A-201	ENSGGOT00000016803	444	147aa	ENSGGOP00000016339

Gene Model

Click here to download ENSGGOG00000016754's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGGOG00000016754's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000011273	78.9116	69.3878	gorilla_gorilla	ENSGGOP00000016339	78.9116	69.3878

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	97.2789	96.5986	pongo_abelii	ENSPPYP00000006343	97.2789	96.5986
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	98.6395	98.6395	pan_paniscus	ENSPPAP00000000066	98.6395	98.6395
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	99.3197	98.6395	homo_sapiens	ENSP00000315098	99.3197	98.6395
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	98.6395	98.6395	pan_troglodytes	ENSPTRP00000010356	98.6395	98.6395
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	59.8639	40.8163	sarcophilus_harrisii	ENSSHAP00000006973	60.274	41.0959
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	56.4626	36.7347	notamacropus_eugenii	ENSMEUP00000013749	59.2857	38.5714
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.068	50.3401	choloepus_hoffmanni	ENSCHOP00000010057	70.5479	50.6849
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	54.4218	39.4558	dasypus_novemcinctus	ENSDNOP00000026324	73.3945	53.211
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.7075	51.0204	erinaceus_europaeus	ENSEEUP00000004491	69.1781	51.3699
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	53.7415	43.5374	echinops_telfairi	ENSETEP00000009112	54.4828	44.1379
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	95.2381	89.1156	macaca_fascicularis	ENSMFAP00000046901	95.2381	89.1156
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	95.2381	89.1156	macaca_mulatta	ENSMMUP00000071965	95.2381	89.1156
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	94.5578	88.4354	papio_anubis	ENSPANP00000009282	94.5578	88.4354
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	73.4694	53.7415	equus_caballus	ENSECAP00000035668	74.4828	54.4828
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	48.9796	canis_lupus_familiaris	ENSCAFP00845032249	68.2759	49.6552
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.7075	50.3401	mustela_putorius_furo	ENSMPUP00000018265	69.6552	51.0345
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	63.9456	46.2585	bos_taurus	ENSBTAP00000068181	66.6667	48.227
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	63.2653	46.9388	ailuropoda_melanoleuca	ENSAMEP00000020961	57.4074	42.5926
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	71.4286	53.0612	urocitellus_parryii	ENSUPAP00010002282	69.5364	51.6556
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	59.1837	37.415	vombatus_ursinus	ENSVURP00010026031	59.589	37.6712
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	72.1088	52.381	panthera_pardus	ENSPPRP00000028086	73.1034	53.1034
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	66.6667	42.8571	oryctolagus_cuniculus	ENSOCUP00000022614	63.6364	40.9091
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	71.4286	53.7415	oryctolagus_cuniculus	ENSOCUP00000018170	71.4286	53.7415
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	65.9864	45.5782	mus_pahari	MGP_PahariEiJ_P0084623	65.1007	44.9664
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	73.4694	53.7415	equus_asinus	ENSEASP00005040517	74.4828	54.4828
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	62.585	42.8571	ochotona_princeps	ENSOPRP00000011957	63.4483	43.4483
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	69.3878	51.0204	bos_indicus_hybrid	ENSBIXP00005037887	69.863	51.3699
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	49.6599	bos_indicus_hybrid	ENSBIXP00005016038	68.4931	50
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.7483	49.6599	camelus_dromedarius	ENSCDRP00005002558	71.2329	50
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	74.1497	51.7007	dipodomys_ordii	ENSDORP00000023132	71.7105	50
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	69.3878	48.9796	delphinapterus_leucas	ENSDLEP00000002311	58.2857	41.1429
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	49.6599	mus_spicilegus	ENSMSIP00000023112	66.443	48.9933
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	66.6667	45.5782	ovis_aries_rambouillet	ENSOARP00020017056	54.7486	37.4302
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.7483	50.3401	ovis_aries_rambouillet	ENSOARP00020017272	71.2329	50.6849
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.068	48.9796	vicugna_pacos	ENSVPAP00000006855	70.5479	49.3151
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	50.3401	balaenoptera_musculus	ENSBMSP00010012166	68.4931	50.6849
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	57.8231	38.0952	phascolarctos_cinereus	ENSPCIP00000039169	54.1401	35.6688
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	72.1088	52.381	panthera_leo	ENSPLOP00000011118	73.1034	53.1034
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	74.1497	54.4218	marmota_marmota_marmota	ENSMMMP00000016924	72.1854	52.9801
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	69.3878	48.2993	monodon_monoceros	ENSMMNP00015013305	69.863	48.6301
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	66.6667	47.619	bison_bison_bison	ENSBBBP00000001783	63.6364	45.4545
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	49.6599	vulpes_vulpes	ENSVVUP00000012288	61.1111	45.0617
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	48.2993	mus_musculus	ENSMUSP00000098210	66.443	47.651
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	65.3061	48.2993	rattus_norvegicus	ENSRNOP00000040734	67.1329	49.6503
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	65.9864	48.9796	rattus_norvegicus	ENSRNOP00000075575	64.6667	48
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	72.7891	53.7415	felis_catus	ENSFCAP00000012770	73.7931	54.4828
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	61.2245	43.5374	loxodonta_africana	ENSLAFP00000027521	61.6438	43.8356
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	64.6258	47.619	loxodonta_africana	ENSLAFP00000025435	65.0685	47.9452
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	77.551	62.585	otolemur_garnettii	ENSOGAP00000006953	77.551	62.585
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	48.9796	cricetulus_griseus_chok1gshd	ENSCGRP00001014058	66	48
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.7483	53.7415	pteropus_vampyrus	ENSPVAP00000012795	71.2329	54.1096
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	59.8639	38.7755	monodelphis_domestica	ENSMODP00000034357	47.8261	30.9783
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	48.9796	canis_lupus_dingo	ENSCAFP00020017993	61.1111	44.4444
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	70.068	50.3401	sus_scrofa	ENSSSCP00000025970	70.5479	50.6849
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	65.9864	46.2585	cervus_hanglu_yarkandensis	ENSCHYP00000021389	66.4384	46.5753
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	71.4286	51.0204	panthera_tigris_altaica	ENSPTIP00000001586	72.4138	51.7241
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	67.3469	48.9796	mus_spretus	MGP_SPRETEiJ_P0038223	66.443	48.3221
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	49.6599	catagonus_wagneri	ENSCWAP00000008427	68.4931	50
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	95.9184	89.1156	chlorocebus_sabaeus	ENSCSAP00000017651	95.9184	89.1156
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	66.6667	48.2993	mus_caroli	MGP_CAROLIEiJ_P0036503	65.7718	47.651
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	72.1088	53.7415	rhinolophus_ferrumequinum	ENSRFEP00010025716	72.6027	54.1096
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	48.2993	neovison_vison	ENSNVIP00000017006	68.9655	48.9655
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	48.9796	neovison_vison	ENSNVIP00000016965	68.9655	49.6552
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	72.7891	53.0612	sciurus_vulgaris	ENSSVLP00005002057	73.2877	53.4247
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	65.9864	37.415	peromyscus_maniculatus_bairdii	ENSPEMP00000033096	65.5405	37.1622
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	68.0272	44.898	peromyscus_maniculatus_bairdii	ENSPEMP00000014635	66.6667	44
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	71.4286	53.0612	myotis_lucifugus	ENSMLUP00000012895	69.5364	51.6556
ENSGGOG00000016754	gorilla_gorilla	ENSGGOP00000016339	69.3878	49.6599	moschus_moschiferus	ENSMMSP00000011160	69.863	50

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression