Description

Ensembl ID ENSGFOG00000007275 Gene ID Accession -
Symbol YBX3 Alias - Full Name Y-box binding protein 3
Status Confidence Length 11129 bases Strand Minus strand
Position JH740164.1 : 604386 - 615514 RNA binding domain CSD
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGFOP00000010446 CSD PF00313 2.6e-26 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
YBX3-201 ENSGFOT00000010795 787 253aa ENSGFOP00000010446

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGFOG00000007275geospiza_fortisENSGFOP0000001522431.74625.3968geospiza_fortisENSGFOP0000001044615.810312.6482
ENSGFOG00000007275geospiza_fortisENSGFOP0000001581935.222728.7449geospiza_fortisENSGFOP0000001044634.387428.0632
ENSGFOG00000007275geospiza_fortisENSGFOP0000000500925.702819.2771geospiza_fortisENSGFOP0000001044625.296418.9723
ENSGFOG00000007275geospiza_fortisENSGFOP0000001058818.779315.0235geospiza_fortisENSGFOP0000001044615.810312.6482
ENSGFOG00000007275geospiza_fortisENSGFOP0000000837024.4318.5668geospiza_fortisENSGFOP0000001044629.644322.5296

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.102855.7312anas_platyrhynchos_platyrhynchosENSAPLP0000000263646.51944.6203
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044666.798463.2411meleagris_gallopavoENSMGAP0000001504465.503962.0155
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044667.984263.6364coturnix_japonicaENSCJPP0000502144860.139956.2937
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044669.1765.2174aquila_chrysaetos_chrysaetosENSACCP0002001078158.528455.1839
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044668.774763.2411struthio_camelus_australisENSSCUP0000001170268.503962.9921
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044667.984264.0316gallus_gallusENSGALP0001003545259.106555.6701
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044669.565266.0079ficedula_albicollisENSFALP0000002280270.967767.3387
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044668.774764.8221strigops_habroptilaENSSHBP000050142175854.6667
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.126552.1739taeniopygia_guttataENSTGUP0000001241076.344170.9677
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044667.588966.0079parus_majorENSPMJP0000001250557.190655.8528
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044666.403264.0316anser_brachyrhynchusENSABRP0000001096544.919843.3155
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044668.774765.6126serinus_canariaENSSCAP0000001161765.413562.406
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044635.177928.4585caenorhabditis_elegansF33A8.3.142.788534.6154
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044635.177928.8538ciona_intestinalisENSCINP0000002110727.812522.8125
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044641.50233.2016oryzias_latipesENSORLP0000000787925.609820.4878
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.893353.7549xenopus_tropicalisENSXETP0000010363960.080654.8387
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044666.403261.2648chrysemys_picta_belliiENSCPBP0000001960747.457643.7853
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217458.498crocodylus_porosusENSCPRP0000500143059.139853.0466
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044652.964450.9881sphenodon_punctatusENSSPUP0000001285263.207560.8491
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044662.845858.1028sarcophilus_harrisiiENSSHAP0000000370945.170541.7614
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044635.573132.8063notamacropus_eugeniiENSMEUP0000000229143.478340.0966
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.91750.9881ornithorhynchus_anatinusENSOANP0000003788767.924560.8491
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.636461.2648choloepus_hoffmanniENSCHOP0000001060143.396241.779
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044637.944732.8063dasypus_novemcinctusENSDNOP0000000036842.857137.0536
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.241157.7075erinaceus_europaeusENSEEUP0000000949456.33851.4085
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.102854.5455echinops_telfairiENSETEP0000000208951.578948.4211
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031658.498callithrix_jacchusENSCJAP0000008212943.431639.6783
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791cercocebus_atysENSCATP0000002139544.235940.7507
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791macaca_mulattaENSMMUP0000002956244.354840.8602
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791macaca_nemestrinaENSMNEP0000004514544.08640.8602
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791macaca_fascicularisENSMFAP0000004408744.354840.8602
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791papio_anubisENSPANP0000005122744.354840.8602
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791gorilla_gorillaENSGGOP0000002538343.967840.7507
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.612660.0791mandrillus_leucophaeusENSMLEP0000001902845.604441.7582
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.4743pan_paniscusENSPPAP0000003238045.96142.6184
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791pan_troglodytesENSPTRP0000000800943.850340.6417
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791homo_sapiensENSP0000022825144.08640.8602
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.6838canis_lupus_familiarisENSCAFP0084503503944.08640.5914
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791pongo_abeliiENSPPYP0000000488644.204940.9704
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044657.707552.1739ursus_americanusENSUAMP0000002128353.479948.3517
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.660155.7312ailuropoda_melanoleucaENSAMEP0000000990752.173947.1572
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044651.383442.6877mustela_putorius_furoENSMPUP0000001171734.300828.496
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.91752.1739vulpes_vulpesENSVVUP0000000647153.731349.2537
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.893352.9644panthera_leoENSPLOP0000000154841.274237.1191
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.893352.9644felis_catusENSFCAP0000001643441.274237.1191
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.6838panthera_pardusENSPPRP0000001225744.08640.5914
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044654.940750.1976tursiops_truncatusENSTTRP0000000761652.651548.1061
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044653.754947.0356physeter_catodonENSPCTP0000503052649.454543.2727
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044645.059340.3162delphinapterus_leucasENSDLEP0000000078344.881940.1575
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044652.569246.6403balaenoptera_musculusENSBMSP0001000892845.704540.5498
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426959.6838equus_asinusENSEASP0000502150944.293541.0326
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791equus_caballusENSECAP0000003102044.565241.3043
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.126550.9881loxodonta_africanaENSLAFP0000001446438.58735.0543
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031659.2885camelus_dromedariusENSCDRP0000501295653.465349.505
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044651.383449.8024procavia_capensisENSPCAP0000000128645.296243.9024
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791sus_scrofaENSSSCP0000002633843.157940
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031659.2885capra_hircusENSCHIP0000000736043.085139.8936
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.264855.7312marmota_marmota_marmotaENSMMMP0000002483242.817738.9503
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426959.6838bos_taurusENSBTAP0000005887134.388231.8565
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.660156.1265oryctolagus_cuniculusENSOCUP0000003418334.437131.3466
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.126552.5692urocitellus_parryiiENSUPAP0001000467933.649331.5166
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.2885cricetulus_griseus_chok1gshdENSCGRP0000101558445.429441.5512
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791dipodomys_ordiiENSDORP0000000854946.197242.8169
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426958.8933mus_musculusENSMUSP0000003230945.152441.2742
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217459.2885mesocricetus_auratusENSMAUP0000001168147.687943.3526
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.2885mus_pahariMGP_PahariEiJ_P005275245.429441.5512
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.2885mus_spretusMGP_SPRETEiJ_P007963345.429441.5512
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.2885mus_caroliMGP_CAROLIEiJ_P007638545.429441.5512
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426958.8933rattus_norvegicusENSRNOP0000000742736.061932.9646
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031658.1028mus_spicilegusENSMSIP0000000993046.551742.2414
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044659.683853.7549octodon_degusENSODEP0000002453045.074640.597
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426958.8933cavia_porcellusENSCPOP0000001018548.082643.9528
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791pelodiscus_sinensisENSPSIP0000001032676.635571.028
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044652.173949.4071heterocephalus_glaber_femaleENSHGLP0000002069246.315843.8596
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031659.2885heterocephalus_glaber_femaleENSHGLP0000002167945.251441.8994
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044662.450658.498monodelphis_domesticaENSMODP0000002275851.132747.8964
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.031659.2885ursus_maritimusENSUMAP0000002202753.642449.6689
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044662.450658.498vombatus_ursinusENSVURP0001000960645.142942.2857
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044660.869655.7312bos_indicus_hybridENSBIXP0000500548543.7540.0568
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044647.430843.4783vicugna_pacosENSVPAP0000000081342.704639.1459
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044660.869655.7312bos_grunniensENSBGRP0000003519243.7540.0568
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044651.383447.0356microcebus_murinusENSMICP0000003629647.61943.5897
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.4743microcebus_murinusENSMICP0000003088844.594641.3514
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.91752.1739otolemur_garnettiiENSOGAP0000001187038.196335.0133
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.636458.8933chinchilla_lanigeraENSCLAP0000002336952.786948.8525
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044641.897236.7589aotus_nancymaaeENSANAP0000003126839.849634.9624
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.612660.4743aotus_nancymaaeENSANAP0000001316744.864941.3514
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044652.964449.8024phascolarctos_cinereusENSPCIP0000004093552.343849.2188
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.4743tupaia_belangeriENSTBEP0000001091045.454542.1488
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044650.988146.2451phocoena_sinusENSPSNP000000088175045.3488
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.6838saimiri_boliviensis_boliviensisENSSBOP0000002864643.157939.7368
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791monodon_monocerosENSMMNP0001502947653.770549.8361
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.91751.7787ictidomys_tridecemlineatusENSSTOP0000000187646.153841.9872
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044662.845857.7075ictidomys_tridecemlineatusENSSTOP0000002583746.764742.9412
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.241158.498bison_bison_bisonENSBBBP0000002665843.126739.8922
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044655.731251.3834myotis_lucifugusENSMLUP0000000682552.611948.5075
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044621.739119.7628anabas_testudineusENSATEP0000002817538.461534.965
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.241158.8933rhinolophus_ferrumequinumENSRFEP0001000697247.337344.0828
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.264856.5217rhinolophus_ferrumequinumENSRFEP0001002187732.56330.042
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.6838panthera_tigris_altaicaENSPTIP0000000224846.590942.8977
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044622.134420.9486labrus_bergyltaENSLBEP0000003522060.869657.6087
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044659.683854.5455neovison_visonENSNVIP0000000124841.944438.3333
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.612660.0791bos_mutusENSBMUP0000003620043.116939.4805
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.660155.7312nomascus_leucogenysENSNLEP0000003090545.348840.9884
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044663.241160.0791pteropus_vampyrusENSPVAP0000000636142.895440.7507
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822159.2885microtus_ochrogasterENSMOCP0000001781348.520744.3787
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217458.8933peromyscus_maniculatus_bairdiiENSPEMP0000000892357.692352.0979
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426958.498peromyscus_maniculatus_bairdiiENSPEMP0000001151746.175641.9263
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044622.134419.7628denticeps_clupeoidesENSDCDP0000001297160.869654.3478
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044654.940747.0356catagonus_wagneriENSCWAP0000001464944.551338.141
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791rhinopithecus_roxellanaENSRROP0000001046744.474440.9704
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044666.798461.2648terrapene_carolina_triunguisENSTMTP0000000846658.680653.8194
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044655.731249.4071gopherus_evgoodeiENSGEVP0000502184044.904539.8089
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.264855.336nannospalax_galiliENSNGAP0000000097234.216330.9051
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791rhinopithecus_bietiENSRBIP0000003073244.474440.9704
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044660.869656.1265cervus_hanglu_yarkandensisENSCHYP0000003186941.847838.587
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044635.968429.6443ciona_savignyiENSCSAVP0000000511127.828722.9358
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.264855.7312canis_lupus_dingoENSCAFP0002000794842.582438.7363
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044637.944736.7589propithecus_coquereliENSPCOP0000000391039.669438.4298
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.49853.7549carlito_syrichtaENSTSYP0000002698151.748347.5524
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044661.264855.7312carlito_syrichtaENSTSYP0000002571545.722741.5929
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.217460.0791chlorocebus_sabaeusENSCSAP0000000495444.235940.7507
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044647.035641.1067jaculus_jaculusENSJJAP0000001072945.247139.5437
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.822160.0791sciurus_vulgarisENSSVLP0000500436144.324341.0811
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044662.055356.5217sciurus_vulgarisENSSVLP0000502690252.508447.8261
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044653.754947.4308moschus_moschiferusENSMMSP0000003185438.202233.7079
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044629.24922.5296cyprinus_carpio_carpioENSCCRP0000012463226.909120.7273
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044641.50234.3874stegastes_partitusENSSPAP0000002189032.012226.5244
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044658.102852.1739chelonoidis_abingdoniiENSCABP0000000841739.095735.1064
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044656.126549.8024leptobrachium_leishanenseENSLLEP0000004860253.183547.191
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044664.426959.2885cebus_imitatorENSCCAP0000000287943.817240.3226
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044665.612660.8696prolemur_simusENSPSMP0000001394344.50441.2869
ENSGFOG00000007275geospiza_fortisENSGFOP0000001044635.968428.4585amphilophus_citrinellusENSACIP0000001912228.797522.7848

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression