Description

Ensembl ID ENSGFOG00000000606 Gene ID Accession -
Symbol SRRM3 Alias - Full Name serine/arginine repetitive matrix 3
Status Confidence Length 18984 bases Strand Minus strand
Position JH739977.1 : 897777 - 916760 RNA binding domain cwf21 , SRRM_C
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGFOP00000000820 cwf21 PF08312 1.8e-15 1
ENSGFOP00000000818 cwf21 PF08312 5.9e-15 1
ENSGFOP00000000818 SRRM_C PF15230 4.2e-15 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SRRM3-201 ENSGFOT00000000834 1478 466aa ENSGFOP00000000818
SRRM3-202 ENSGFOT00000000836 1042 243aa ENSGFOP00000000820

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGFOG00000000606

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081831.330527.897anas_platyrhynchos_platyrhynchosENSAPLP0000002147632.516728.9532
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081828.540825.7511meleagris_gallopavoENSMGAP0000000342933.585930.303
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081858.369153.0043coturnix_japonicaENSCJPP0000501142443.589739.5833
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081858.583753.0043gallus_gallusENSGALP0001004429043.540739.3939
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081832.832629.3991ficedula_albicollisENSFALP0000002230935.253531.5668
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081859.227553.8627strigops_habroptilaENSSHBP0000501486843.396239.4654
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081860.300455.794taeniopygia_guttataENSTGUP0000003090041.445438.3481
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081860.51555.794parus_majorENSPMJP0000002595044.409540.9449
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081858.583752.7897anser_brachyrhynchusENSABRP0000000169339.622635.7039
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081839.055830.0429latimeria_chalumnaeENSLACP0000000907230.639723.569
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.347635.1931lepisosteus_oculatusENSLOCP0000000339130.284924.5877
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.13333.9056carassius_auratusENSCARP0000000678933.388726.2458
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.347635.1931astyanax_mexicanusENSAMXP0000001653032.268426.1981
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.13333.2618ictalurus_punctatusENSIPUP0000001832932.471725.0404
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.201733.0472esox_luciusENSELUP0000005820229.953224.025
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.274734.3348oncorhynchus_kisutchENSOKIP0000502090130.261124.5776
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.274733.691oncorhynchus_mykissENSOMYP0000011066330.401224.2284
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.845534.1202oncorhynchus_mykissENSOMYP0000001718729.862224.3492
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.201732.8326salmo_salarENSSSAP0000014919928.486622.7003
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.489334.1202salmo_salarENSSSAP0000002961530.461524.4615
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.489334.3348salmo_truttaENSSTUP0000003923330.321624.5023
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.343331.7597poecilia_reticulataENSPREP0000001196729.37523.125
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.343331.3305xiphophorus_maculatusENSXMAP0000003580029.37522.8125
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081839.914231.3305oryzias_latipesENSORLP0000004028129.665123.2855
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.772531.3305oreochromis_niloticusENSONIP0000001602329.366322.5657
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.987130.6867haplochromis_burtoniENSHBUP0000002395729.797222.3089
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.703932.1888sparus_aurataENSSAUP0001000409730.757323.1839
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.987130.9013astatotilapia_callipteraENSACLP0000000774129.890522.5352
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081849.356242.4893xenopus_tropicalisENSXETP0000008212536.334931.2796
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.201732.4034lates_calcariferENSLCAP0001003798329.447923.1595
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081856.86750.4292chrysemys_picta_belliiENSCPBP0000004042841.732337.0079
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.424943.7768sphenodon_punctatusENSSPUP0000000811763.872858.9595
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081828.9723.3906sarcophilus_harrisiiENSSHAP0000004079539.705932.0588
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081838.41231.1159notamacropus_eugeniiENSMEUP0000001278630.134724.4108
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081830.686725.3219ornithorhynchus_anatinusENSOANP0000004432929.183724.0816
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712440.7725dasypus_novemcinctusENSDNOP0000003502234.923129.2308
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.497941.2017callithrix_jacchusENSCJAP0000003000034.609529.4028
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.639540.5579cercocebus_atysENSCATP0000004106139.222633.3922
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.9871macaca_mulattaENSMMUP0000005161934.403729.2049
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081839.699633.9056papio_anubisENSPANP0000000382932.062427.383
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.991437.3391gorilla_gorillaENSGGOP0000003159436.738331.1828
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712441.2017pan_troglodytesENSPTRP0000003304034.762629.4028
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.5579homo_sapiensENSP0000048085134.456428.9433
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.92740.7725canis_lupus_familiarisENSCAFP0084500623234.756128.9634
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.92741.4163pongo_abeliiENSPPYP0000001958434.915829.5559
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081825.965721.4592ailuropoda_melanoleucaENSAMEP0000003390233.060127.3224
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.497940.9871panthera_leoENSPLOP0000003063234.503829.1603
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.497940.9871felis_catusENSFCAP0000004576334.769229.3846
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081844.849838.1974panthera_pardusENSPPRP0000001283237.388231.8426
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081838.197434.1202tursiops_truncatusENSTTRP0000001406530.849227.5563
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081826.394821.2446physeter_catodonENSPCTP0000501296933.51526.9755
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081836.480727.6824delphinapterus_leucasENSDLEP0000001072628.333321.5
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068740.3433balaenoptera_musculusENSBMSP0001002893834.408628.8786
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.557933.4764equus_asinusENSEASP0000504389231.085525.6579
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081849.356241.6309equus_caballusENSECAP0000001955635.007629.5282
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081837.553627.897loxodonta_africanaENSLAFP0000002132326.595719.7568
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081835.622330.9013procavia_capensisENSPCAP0000001284228.970325.1309
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068740.3433sus_scrofaENSSSCP0000006879334.355828.8344
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.854140.3433ovis_aries_rambouilletENSOARP0002003072434.466829.0572
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.3433capra_hircusENSCHIP0000001213737.006630.9211
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081821.888418.8841ochotona_princepsENSOPRP0000000768820.647817.8138
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081825.107320.6009bos_taurusENSBTAP0000004811737.530.7692
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712441.2017urocitellus_parryiiENSUPAP0001001951134.976929.584
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.92740.5579cricetulus_griseus_chok1gshdENSCGRP0000100925535.185229.1667
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283339.9142mus_musculusENSMUSP0000011569534.722228.7037
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.1288mesocricetus_auratusENSMAUP0000001934334.775928.9026
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283339.6996mus_pahariMGP_PahariEiJ_P005959934.722228.5494
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283339.9142mus_spretusMGP_SPRETEiJ_P007411934.722228.7037
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081826.180321.2446mus_caroliMGP_CAROLIEiJ_P007136835.672528.9474
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712439.9142rattus_norvegicusENSRNOP0000000195735.030928.7037
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283339.6996mus_spicilegusENSMSIP0000001418434.722228.5494
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081849.356241.6309octodon_degusENSODEP0000002173935.548729.9845
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.274735.1931cavia_porcellusENSCPOP0000003159031.621226.3242
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.639540.3433pelodiscus_sinensisENSPSIP0000000863534.850929.5133
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.918532.8326dicentrarchus_labraxENSDLAP0000506907529.940122.9042
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081844.420638.6266erpetoichthys_calabaricusENSECRP0000002691932.909428.6169
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.854137.3391monodelphis_domesticaENSMODP0000004028536.378528.385
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068742.9185anolis_carolinensisENSACAP0000000043138.687434.5423
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068740.5579bos_indicus_hybridENSBIXP0000503027934.621329.2117
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068740.7725bos_grunniensENSBGRP0000001338634.728729.4574
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712441.2017microcebus_murinusENSMICP0000000972738.737232.7645
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.845532.1888takifugu_rubripesENSTRUP0000007772930.373823.3645
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.068740.7725otolemur_garnettiiENSOGAP0000001931434.250829.052
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.343331.3305oryzias_melastigmaENSOMEP0000000955929.746823.1013
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081849.141641.6309chinchilla_lanigeraENSCLAP0000001112035.015329.6636
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.201731.7597kryptolebias_marmoratusENSKMAP0000001812229.813722.9814
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081835.622327.2532aotus_nancymaaeENSANAP0000002827826.948120.6169
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081830.042924.2489phascolarctos_cinereusENSPCIP0000004408233.175426.7773
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081845.493638.8412phocoena_sinusENSPSNP0000000758434.471529.4309
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.5579monodon_monocerosENSMMNP0001501071437.251731.2914
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.562234.5494pygocentrus_nattereriENSPNAP0000000322331.818225.2351
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.497941.2017ictidomys_tridecemlineatusENSSTOP0000001271040.794234.657
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081839.055833.691bison_bison_bisonENSBBBP0000001844730.847526.6102
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081839.914230.9013poecilia_formosaENSPFOP0000000896729.570722.8935
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283340.3433rhinolophus_ferrumequinumENSRFEP0001001202934.090928.4848
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.562234.3348cynoglossus_semilaevisENSCSEP0000001709828.712922.6308
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.060132.4034acanthochromis_polyacanthusENSAPOP0000002629730.340623.3746
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081853.218946.1373salvator_merianaeENSSMRP0000000399539.743634.4551
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081845.708237.5536nomascus_leucogenysENSNLEP0000001026837.632530.9187
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.060134.3348oncorhynchus_tshawytschaENSOTSP0000504552430.015324.5023
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081828.326222.9614pteropus_vampyrusENSPVAP0000000321520.214416.3859
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081849.141640.9871microtus_ochrogasterENSMOCP0000000321435.339529.4753
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.497940.7725peromyscus_maniculatus_bairdiiENSPEMP0000001184135.646729.9685
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081836.909931.9742denticeps_clupeoidesENSDCDP0000003685234.677430.0403
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.343331.1159oryzias_javanicusENSOJAP0000003967528.923122.3077
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.128831.7597tetraodon_nigroviridisENSTNIP0000001138928.68122.6994
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081844.635237.5536rhinopithecus_roxellanaENSRROP0000002219438.165132.1101
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081825.536521.03cervus_hanglu_yarkandensisENSCHYP0000001540327.045522.2727
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712440.5579canis_lupus_dingoENSCAFP0002001630036.08930.0477
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.283341.2017propithecus_coquereliENSPCOP0000003138934.456429.4028
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081844.420638.6266chlorocebus_sabaeusENSCSAP0000001415634.615430.1003
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081840.772532.4034nothobranchius_furzeriENSNFUP0001502580130.158723.9683
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.13335.6223jaculus_jaculusENSJJAP0000002378131.018525.6173
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.060135.1931scleropages_formosusENSSFOP0001504768829.341324.5509
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.92741.6309sciurus_vulgarisENSSVLP0000502640835.02329.8003
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.489333.0472sander_luciopercaENSSLUP0000001164030.602823.8022
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081847.854140.3433moschus_moschiferusENSMMSP0000000877634.466829.0572
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081842.489333.691cyprinus_carpio_carpioENSCCRP0000017121832.45925.7377
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081844.849833.4764cyprinus_carpio_carpioENSCCRP0000011955333.873625.2836
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081843.776835.6223paramormyrops_kingsleyaeENSPKIP0000004015331.43325.5778
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081851.931343.3476leptobrachium_leishanenseENSLLEP0000003152638.844332.4238
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081848.712441.4163cebus_imitatorENSCCAP0000003064134.762629.5559
ENSGFOG00000000606geospiza_fortisENSGFOP0000000081841.416332.4034seriola_lalandi_dorsalisENSSLDP0000002579129.154122.8097

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression