| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSGEVG00005015173 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
8907 bases |
Strand |
Plus strand |
| Position |
VHHN01000272.1 : 4797296 - 4806202 |
RNA binding domain |
PPR |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSGEVP00005021817 |
PPR |
PF01535 |
6.6e-06 |
1 |
| ENSGEVP00005022097 |
PPR |
PF01535 |
6.7e-06 |
1 |
| ENSGEVP00005021735 |
PPR |
PF01535 |
7.6e-06 |
1 |
| ENSGEVP00005021569 |
PPR |
PF01535 |
8e-06 |
1 |
| ENSGEVP00005022187 |
PPR |
PF01535 |
1.2e-05 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
ENSGEVT00005022662 |
1635 |
544aa |
ENSGEVP00005021569 |
| - |
ENSGEVT00005022831 |
1593 |
530aa |
ENSGEVP00005021735 |
| - |
ENSGEVT00005022920 |
1542 |
513aa |
ENSGEVP00005021817 |
| - |
ENSGEVT00005023107 |
948 |
315aa |
ENSGEVP00005021994 |
| - |
ENSGEVT00005023214 |
1557 |
518aa |
ENSGEVP00005022097 |
| - |
ENSGEVT00005023312 |
1770 |
589aa |
ENSGEVP00005022187 |
| - |
ENSGEVT00005023373 |
993 |
330aa |
ENSGEVP00005022246 |
| - |
ENSGEVT00005023449 |
996 |
331aa |
ENSGEVP00005022320 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005005382 | 16.6276 | 9.60187 | gopherus_evgoodei | ENSGEVP00005022187 | 36.163 | 20.8829 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005020119 | 60.2254 | 51.8519 | gopherus_evgoodei | ENSGEVP00005022187 | 63.4975 | 54.6689 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005000191 | 59.434 | 50.1572 | gopherus_evgoodei | ENSGEVP00005022187 | 64.1766 | 54.1596 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005016470 | 30.6962 | 17.7215 | gopherus_evgoodei | ENSGEVP00005022187 | 32.9372 | 19.0153 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005003788 | 62.9513 | 52.9042 | gopherus_evgoodei | ENSGEVP00005022187 | 68.0815 | 57.2156 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 46.18 | 33.107 | caenorhabditis_elegans | M7.2b.1 | 50.7463 | 36.3806 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 56.5365 | 45.3311 | caenorhabditis_elegans | C18C4.10b.2 | 61.6667 | 49.4444 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 54.8387 | 45.5009 | drosophila_melanogaster | FBpp0075683 | 63.5827 | 52.7559 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 60.781 | 49.236 | ciona_intestinalis | ENSCINP00000034474 | 59.9665 | 48.5762 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 60.9508 | 52.292 | petromyzon_marinus | ENSPMAP00000010118 | 62.2184 | 53.3796 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 33.9559 | 26.4856 | callorhinchus_milii | ENSCMIP00000009058 | 44.4444 | 34.6667 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 21.2224 | 14.601 | eptatretus_burgeri | ENSEBUP00000011063 | 69.4444 | 47.7778 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 56.8761 | 46.0102 | eptatretus_burgeri | ENSEBUP00000001468 | 61.4679 | 49.7248 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 62.9881 | 50.2547 | latimeria_chalumnae | ENSLACP00000016311 | 59.9354 | 47.8191 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 59.9321 | 50.0849 | clupea_harengus | ENSCHAP00000010024 | 57.2123 | 47.812 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 85.399 | 82.8523 | chrysemys_picta_bellii | ENSCPBP00000013452 | 95.6274 | 92.7757 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 69.6095 | 59.9321 | laticauda_laticaudata | ENSLLTP00000001601 | 79.7665 | 68.677 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 64.8557 | 55.6876 | notechis_scutatus | ENSNSUP00000015167 | 71.2687 | 61.194 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 64.8557 | 55.6876 | notechis_scutatus | ENSNSUP00000015222 | 71.2687 | 61.194 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 61.2903 | 52.292 | pseudonaja_textilis | ENSPTXP00000021290 | 67.9849 | 58.0038 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 19.0153 | 14.4312 | anolis_carolinensis | ENSACAP00000036880 | 28.5714 | 21.6837 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 70.2886 | 60.6112 | naja_naja | ENSNNAP00000026695 | 80.5447 | 69.4553 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 61.2903 | 48.5569 | ciona_savignyi | ENSCSAVP00000013045 | 61.4991 | 48.7223 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 20.5433 | 16.8081 | hucho_hucho | ENSHHUP00000008881 | 64.0212 | 52.381 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 77.5891 | 68.7606 | podarcis_muralis | ENSPMRP00000023673 | 77.3266 | 68.5279 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 70.4584 | 61.7997 | salvator_merianae | ENSSMRP00000022673 | 73.975 | 64.8841 |
| ENSGEVG00005015173 | gopherus_evgoodei | ENSGEVP00005022187 | 17.9966 | 17.657 | terrapene_carolina_triunguis | ENSTMTP00000026024 | 94.6429 | 92.8571 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
