RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	ENSGEVG00005012656	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	5320 bases	Strand	Plus strand
Position	7 : 86972692 - 86978011	RNA binding domain	GN3L_Grn1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGEVP00005017829	GN3L_Grn1	PF08701	2.6e-22	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSGEVT00005018734	491	75aa	ENSGEVP00005017829

Gene Model

Click here to download ENSGEVG00005012656's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGEVG00005012656's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005028903	5.7971	3.98551	gopherus_evgoodei	ENSGEVP00005017829	42.6667	29.3333
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005010753	4.13476	2.29709	gopherus_evgoodei	ENSGEVP00005017829	36	20
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005006048	6.11111	2.77778	gopherus_evgoodei	ENSGEVP00005017829	58.6667	26.6667
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005007752	5.76	2.88	gopherus_evgoodei	ENSGEVP00005017829	48	24
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005023602	0.768049	0.30722	gopherus_evgoodei	ENSGEVP00005017829	6.66667	2.66667
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005008162	3.80952	2.53968	gopherus_evgoodei	ENSGEVP00005017829	16	10.6667
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017869	1.33038	1.10865	gopherus_evgoodei	ENSGEVP00005017829	8	6.66667

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	28	13.3333	caenorhabditis_elegans	Y48E1B.2a.1	2.66836	1.27065
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	26.6667	10.6667	drosophila_melanogaster	FBpp0085924	3.20513	1.28205
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	80	65.3333	petromyzon_marinus	ENSPMAP00000001195	27.3973	22.3744
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	0	0	eptatretus_burgeri	ENSEBUP00000026055	0	0
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	94.6667	92	chrysemys_picta_bellii	ENSCPBP00000025814	60.1695	58.4746
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	89.3333	85.3333	ailuropoda_melanoleuca	ENSAMEP00000022224	51.145	48.855
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	61.3333	45.3333	heterocephalus_glaber_female	ENSHGLP00000042509	34.8485	25.7576
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	84	70.6667	erpetoichthys_calabaricus	ENSECRP00000029384	66.3158	55.7895
ENSGEVG00005012656	gopherus_evgoodei	ENSGEVP00005017829	93.3333	90.6667	chelonoidis_abingdonii	ENSCABP00000015477	36.6492	35.6021

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression