| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | ENSGALG00010002798 | Gene ID |
101747534 |
Accession |
- |
| Symbol |
TRIM39.1 |
Alias |
- |
Full Name |
tripartite motif containing 39.1 |
| Status |
Confidence |
Length |
4382 bases |
Strand |
Minus strand |
| Position |
16 : 2130569 - 2134950 |
RNA binding domain |
SPRY |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| ENSGALP00010003990 |
SPRY |
PF00622 |
2.6e-10 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| TRIM39.1-201 |
ENSGALT00010006481 |
1662 |
291aa |
ENSGALP00010003990 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010029425 | 5.51671 | 3.108 | gallus_gallus | ENSGALP00010003990 | 24.3986 | 13.7457 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010043351 | 8.29315 | 4.91803 | gallus_gallus | ENSGALP00010003990 | 29.5533 | 17.5258 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010026909 | 12.8857 | 6.35209 | gallus_gallus | ENSGALP00010003990 | 24.3986 | 12.0275 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010004010 | 15.3846 | 6.97115 | gallus_gallus | ENSGALP00010003990 | 21.9931 | 9.96564 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010021606 | 10.6259 | 6.9869 | gallus_gallus | ENSGALP00010003990 | 25.0859 | 16.4948 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010011152 | 12 | 6.66667 | gallus_gallus | ENSGALP00010003990 | 24.7423 | 13.7457 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010011111 | 12.3762 | 4.70297 | gallus_gallus | ENSGALP00010003990 | 17.1821 | 6.52921 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010044098 | 18.2927 | 11.9919 | gallus_gallus | ENSGALP00010003990 | 30.9278 | 20.2749 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010038404 | 7.32601 | 3.93773 | gallus_gallus | ENSGALP00010003990 | 27.4914 | 14.7766 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010039109 | 10.8108 | 5.57432 | gallus_gallus | ENSGALP00010003990 | 21.9931 | 11.3402 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010017040 | 19.1686 | 12.4711 | gallus_gallus | ENSGALP00010003990 | 28.5223 | 18.5567 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010038089 | 7.94326 | 4.11348 | gallus_gallus | ENSGALP00010003990 | 19.244 | 9.96564 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010041465 | 19.5431 | 12.6904 | gallus_gallus | ENSGALP00010003990 | 26.4605 | 17.1821 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010044203 | 12.9464 | 8.63095 | gallus_gallus | ENSGALP00010003990 | 29.8969 | 19.9313 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010005990 | 6.15942 | 3.26087 | gallus_gallus | ENSGALP00010003990 | 17.5258 | 9.27835 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010005640 | 11.5108 | 4.4964 | gallus_gallus | ENSGALP00010003990 | 21.9931 | 8.59107 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010012710 | 15.6658 | 6.26632 | gallus_gallus | ENSGALP00010003990 | 20.6186 | 8.24742 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010001153 | 10.7629 | 5.72207 | gallus_gallus | ENSGALP00010003990 | 27.1478 | 14.433 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010023601 | 18.2879 | 11.8677 | gallus_gallus | ENSGALP00010003990 | 32.3024 | 20.9622 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010002773 | 11.5108 | 6.90647 | gallus_gallus | ENSGALP00010003990 | 27.4914 | 16.4948 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003808 | 18.4739 | 12.0482 | gallus_gallus | ENSGALP00010003990 | 31.6151 | 20.6186 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010004066 | 27.9373 | 20.3655 | gallus_gallus | ENSGALP00010003990 | 36.7698 | 26.8041 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010004001 | 21.0101 | 15.5556 | gallus_gallus | ENSGALP00010003990 | 35.7388 | 26.4605 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003965 | 24.5161 | 18.0645 | gallus_gallus | ENSGALP00010003990 | 39.1753 | 28.866 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010044723 | 12.6285 | 7.78267 | gallus_gallus | ENSGALP00010003990 | 29.5533 | 18.2131 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010025054 | 8.09578 | 4.21893 | gallus_gallus | ENSGALP00010003990 | 24.3986 | 12.7148 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010027988 | 7.09759 | 4.56274 | gallus_gallus | ENSGALP00010003990 | 19.244 | 12.3711 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010010230 | 7.35695 | 5.31335 | gallus_gallus | ENSGALP00010003990 | 18.5567 | 13.4021 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010030756 | 8.21382 | 3.25945 | gallus_gallus | ENSGALP00010003990 | 21.6495 | 8.59107 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010030723 | 5.00894 | 1.78891 | gallus_gallus | ENSGALP00010003990 | 9.62199 | 3.43643 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010019911 | 11.2903 | 6.1828 | gallus_gallus | ENSGALP00010003990 | 28.866 | 15.8076 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010044721 | 12.2517 | 7.61589 | gallus_gallus | ENSGALP00010003990 | 25.4296 | 15.8076 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010014227 | 16.7598 | 11.1732 | gallus_gallus | ENSGALP00010003990 | 30.9278 | 20.6186 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010002078 | 10.2088 | 5.10441 | gallus_gallus | ENSGALP00010003990 | 30.2405 | 15.1203 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010033178 | 11.6761 | 7.53296 | gallus_gallus | ENSGALP00010003990 | 21.3058 | 13.7457 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010022851 | 14 | 4.75 | gallus_gallus | ENSGALP00010003990 | 19.244 | 6.52921 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010018636 | 7.47368 | 4.21053 | gallus_gallus | ENSGALP00010003990 | 24.3986 | 13.7457 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010043060 | 13.9104 | 8.03709 | gallus_gallus | ENSGALP00010003990 | 30.9278 | 17.8694 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010044136 | 22.2222 | 14.1612 | gallus_gallus | ENSGALP00010003990 | 35.0515 | 22.3368 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010010772 | 5.074 | 2.74841 | gallus_gallus | ENSGALP00010003990 | 8.24742 | 4.46735 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010025364 | 15.8333 | 10.5 | gallus_gallus | ENSGALP00010003990 | 32.646 | 21.6495 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010004028 | 16.879 | 12.5796 | gallus_gallus | ENSGALP00010003990 | 36.4261 | 27.1478 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010041142 | 33.6996 | 26.0073 | gallus_gallus | ENSGALP00010003990 | 31.6151 | 24.3986 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010004083 | 28.0591 | 19.6203 | gallus_gallus | ENSGALP00010003990 | 45.7045 | 31.9588 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010040364 | 20.2941 | 13.2353 | gallus_gallus | ENSGALP00010003990 | 47.4227 | 30.9278 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003905 | 23.3542 | 15.674 | gallus_gallus | ENSGALP00010003990 | 51.2027 | 34.3643 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003988 | 34.6895 | 24.197 | gallus_gallus | ENSGALP00010003990 | 55.6701 | 38.8316 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 36.4261 | 27.8351 | anser_brachyrhynchus | ENSABRP00000001946 | 41.4062 | 31.6406 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 35.7388 | 25.4296 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000028263 | 45.614 | 32.4561 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 38.488 | 28.5223 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000029236 | 38.6207 | 28.6207 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 36.4261 | 26.8041 | anas_platyrhynchos_platyrhynchos | ENSAPLP00000024767 | 34.3042 | 25.2427 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 59.1065 | 53.9519 | coturnix_japonica | ENSCJPP00005019449 | 70.7819 | 64.6091 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 41.5808 | 29.5533 | struthio_camelus_australis | ENSSCUP00000007821 | 27.13 | 19.2825 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 58.4192 | 53.6082 | meleagris_gallopavo | ENSMGAP00000018113 | 82.5243 | 75.7282 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 64.9485 | 53.9519 | strigops_habroptila | ENSSHBP00005008860 | 64.726 | 53.7671 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 3.78007 | 1.37457 | callorhinchus_milii | ENSCMIP00000003166 | 9.73451 | 3.53982 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 39.8625 | 31.2715 | chrysemys_picta_bellii | ENSCPBP00000006028 | 39.8625 | 31.2715 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 21.6495 | 15.1203 | sphenodon_punctatus | ENSSPUP00000014220 | 41.4474 | 28.9474 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 30.2405 | 22.3368 | laticauda_laticaudata | ENSLLTP00000001701 | 34.7826 | 25.6917 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 36.4261 | 26.1168 | notechis_scutatus | ENSNSUP00000014359 | 53.8071 | 38.5787 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 37.1134 | 25.7732 | pseudonaja_textilis | ENSPTXP00000022888 | 42.6877 | 29.6443 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 2.4055 | 1.37457 | cyprinodon_variegatus | ENSCVAP00000017856 | 14 | 8 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 12.3711 | 6.87285 | pelodiscus_sinensis | ENSPSIP00000008170 | 26.4706 | 14.7059 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 46.3918 | 34.0206 | naja_naja | ENSNNAP00000002069 | 33.6658 | 24.6883 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 30.9278 | 21.9931 | pygocentrus_nattereri | ENSPNAP00000017800 | 39.1304 | 27.8261 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 3.78007 | 2.06186 | kryptolebias_marmoratus | ENSKMAP00000023366 | 8.66142 | 4.72441 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 37.457 | 27.1478 | anolis_carolinensis | ENSACAP00000033920 | 41.9231 | 30.3846 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 32.3024 | 24.3986 | podarcis_muralis | ENSPMRP00000005219 | 60.2564 | 45.5128 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 37.8007 | 30.2405 | podarcis_muralis | ENSPMRP00000001080 | 34.5912 | 27.673 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 34.7079 | 28.1787 | podarcis_muralis | ENSPMRP00000004735 | 32.6861 | 26.5372 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 42.268 | 30.9278 | podarcis_muralis | ENSPMRP00000000778 | 42.7083 | 31.25 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 31.9588 | 24.7423 | gopherus_evgoodei | ENSGEVP00005030073 | 49.2063 | 38.0952 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 37.1134 | 27.4914 | salvator_merianae | ENSSMRP00000011042 | 43.2 | 32 |
| ENSGALG00010002798 | gallus_gallus | ENSGALP00010003990 | 36.7698 | 27.8351 | salvator_merianae | ENSSMRP00000011106 | 38.0783 | 28.8256 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
