Description

Ensembl ID ENSGALG00000001540 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7257 bases Strand Plus strand
Position 23 : 3668448 - 3675704 RNA binding domain SF3a60_Prp9_C , SF3a60_bindingd
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGALP00000002338 SF3a60_Prp9_C PF11931 9.2e-55 1
ENSGALP00000002338 SF3a60_bindingd PF12108 1.6e-15 2
ENSGALP00000096166 SF3a60_Prp9_C PF11931 9.3e-55 1
ENSGALP00000096166 SF3a60_bindingd PF12108 1.7e-15 2
ENSGALP00000076284 SF3a60_Prp9_C PF11931 1e-54 1
ENSGALP00000076284 SF3a60_bindingd PF12108 1.7e-15 2
ENSGALP00000082996 SF3a60_Prp9_C PF11931 5.9e-37 1
ENSGALP00000082996 SF3a60_bindingd PF12108 1.5e-15 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
SF3A3-201 ENSGALT00000002340 1701 478aa ENSGALP00000002338
SF3A3-202 ENSGALT00000111227 1795 460aa ENSGALP00000082996
SF3A3-204 ENSGALT00000140465 2023 489aa ENSGALP00000096166
SF3A3-203 ENSGALT00000118453 2103 501aa ENSGALP00000076284

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGALG00000001540

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGALG00000001540

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression