Description

Ensembl ID ENSGAGG00000025617 Gene ID Accession -
Symbol Alias - Full Name SMG6 nonsense mediated mRNA decay factor
Status Confidence Length 146811 bases Strand Minus strand
Position PPEB01002138.1 : 12211 - 159021 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGAGP00000036145 EST1 PF10374 2e-14 1
ENSGAGP00000036145 PIN_4 PF13638 2.1e-21 2
ENSGAGP00000036145 EST1_DNA_bind PF10373 2.3e-59 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSGAGT00000040922 4413 1391aa ENSGAGP00000036145

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAGG00000025617

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAGG00000025617

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression