RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	ENSGAGG00000021952	Gene ID		Accession	-
Symbol		Alias	-	Full Name	pentatricopeptide repeat domain 2
Status	Confidence	Length	31659 bases	Strand	Minus strand
Position	PPEB01004123.1 : 106332 - 137990	RNA binding domain	PPR , MRP-S27
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
ENSGAGP00000030485	PPR	PF01535	1e-05	1
ENSGAGP00000030485	MRP-S27	PF10037	3e-11	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	ENSGAGT00000034591	1723	390aa	ENSGAGP00000030485

Gene Model

Click here to download ENSGAGG00000021952's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download ENSGAGG00000021952's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGAGG00000021952

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
ENSGAGG00000021952

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression