RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | ENSGAGG00000016131 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
SMG5 nonsense mediated mRNA decay factor |
Status |
Confidence |
Length |
44685 bases |
Strand |
Plus strand |
Position |
PPEB01000938.1 : 285636 - 330320 |
RNA binding domain |
EST1 , PIN_4 , EST1_DNA_bind |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
ENSGAGP00000021984 |
EST1 |
PF10374 |
1.4e-22 |
1 |
ENSGAGP00000021984 |
PIN_4 |
PF13638 |
3.3e-06 |
2 |
ENSGAGP00000021984 |
EST1_DNA_bind |
PF10373 |
3.3e-38 |
3 |
ENSGAGP00000021984 |
EST1_DNA_bind |
PF10373 |
3.3e-38 |
4 |
ENSGAGP00000021988 |
EST1 |
PF10374 |
1.4e-22 |
1 |
ENSGAGP00000021988 |
PIN_4 |
PF13638 |
3.3e-06 |
2 |
ENSGAGP00000021988 |
EST1_DNA_bind |
PF10373 |
3.3e-38 |
3 |
ENSGAGP00000021988 |
EST1_DNA_bind |
PF10373 |
3.3e-38 |
4 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
ENSGAGT00000025048 |
3238 |
1052aa |
ENSGAGP00000021984 |
- |
ENSGAGT00000025052 |
3238 |
1052aa |
ENSGAGP00000021988 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSGAGG00000016131 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
ENSGAGG00000016131 | | | | | | | | |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |