Description

Ensembl ID ENSGAGG00000016131 Gene ID Accession -
Symbol Alias - Full Name SMG5 nonsense mediated mRNA decay factor
Status Confidence Length 44685 bases Strand Plus strand
Position PPEB01000938.1 : 285636 - 330320 RNA binding domain EST1 , PIN_4 , EST1_DNA_bind
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
ENSGAGP00000021984 EST1 PF10374 1.4e-22 1
ENSGAGP00000021984 PIN_4 PF13638 3.3e-06 2
ENSGAGP00000021984 EST1_DNA_bind PF10373 3.3e-38 3
ENSGAGP00000021984 EST1_DNA_bind PF10373 3.3e-38 4
ENSGAGP00000021988 EST1 PF10374 1.4e-22 1
ENSGAGP00000021988 PIN_4 PF13638 3.3e-06 2
ENSGAGP00000021988 EST1_DNA_bind PF10373 3.3e-38 3
ENSGAGP00000021988 EST1_DNA_bind PF10373 3.3e-38 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- ENSGAGT00000025048 3238 1052aa ENSGAGP00000021984
- ENSGAGT00000025052 3238 1052aa ENSGAGP00000021988

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAGG00000016131

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
ENSGAGG00000016131

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression